Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPL23AP89-201ENST00000439324 255 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC100770.1-201ENST00000532310 322 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AL162274.2-201ENST00000614406 332 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC005831.1-201ENST00000624384 1697 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 SNORD9-201ENST00000362566 104 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AL136131.1-201ENST00000406079 803 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 BX842559.1-201ENST00000419615 532 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC004448.2-201ENST00000422360 586 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC138832.1-201ENST00000522871 556 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 NPM1P37-201ENST00000403105 874 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC073508.1-201ENST00000428866 656 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 HMGB1P18-201ENST00000438801 619 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC108734.1-201ENST00000439549 399 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 CCDC75P1-201ENST00000469247 791 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC009852.2-201ENST00000567898 485 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC009464.1-201ENST00000615731 469 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AL022323.4-201ENST00000623980 13120 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 MRPS33P4-201ENST00000434892 317 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 NPM1P13-201ENST00000452663 865 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 MIR4276-201ENST00000584832 70 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC008759.1-201ENST00000589783 983 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC009159.1-201ENST00000618386 642 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC022968.1-201ENST00000567372 442 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AP003392.5-201ENST00000607857 415 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 AC026422.1-201ENST00000623961 452 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 BMS1P21-201ENST00000634565 365 ntBASIC3.06□□□□□ -1.92
CSMD1Q96PZ7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 RNA5SP164-201ENST00000516533 110 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AC093535.2-201ENST00000624769 2326 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AC245054.1-201ENST00000420944 258 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 HSPE1P27-201ENST00000430808 296 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 snoU109.6-201ENST00000516831 118 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AL390816.3-201ENST00000604527 1066 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms