Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 RNA5SP502-201ENST00000362694 119 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 RN7SKP115-201ENST00000363177 317 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 RNU4-4P-201ENST00000364588 130 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 RNU6-619P-201ENST00000365146 108 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 SNORA70E-201ENST00000384492 135 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AL591848.1-201ENST00000413092 322 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AL645931.1-201ENST00000439737 410 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AURKAPS2-201ENST00000454983 333 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 snoU13.20-201ENST00000459180 104 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC018635.1-201ENST00000468292 1030 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 RPS6P4-201ENST00000494693 758 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 SNX5P1-201ENST00000505757 1041 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC118282.2-201ENST00000508739 374 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC090281.1-201ENST00000523019 276 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC100770.1-201ENST00000532310 322 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC105129.1-201ENST00000560250 297 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 MIR3908-201ENST00000579798 126 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC022069.1-201ENST00000582910 658 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC011492.1-201ENST00000600023 315 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 LLPHP1-201ENST00000603571 367 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 VN1R74P-201ENST00000613259 503 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 MIR4496-201ENST00000635896 61 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS33AQ96AX1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
VPS33AQ96AX1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS33AQ96AX1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS33AQ96AX1 RNU6-444P-201ENST00000383988 108 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 MIR153-1-201ENST00000384914 90 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 FABP12P1-201ENST00000401911 322 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RPL7P27-201ENST00000403775 720 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RN7SKP216-201ENST00000411050 312 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 TMSB4XP1-201ENST00000424567 135 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RPL12P11-201ENST00000439970 501 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC006967.1-201ENST00000467608 589 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC008427.1-201ENST00000503102 655 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 BTF3P13-201ENST00000513224 490 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RN7SKP277-201ENST00000516895 283 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC090151.1-201ENST00000520784 730 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 CENPUP2-201ENST00000555897 1186 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 MTCYBP28-201ENST00000566728 1132 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 MTND6P33-201ENST00000571794 183 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AL121834.1-201ENST00000572284 509 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RNU6-1192P-201ENST00000612197 107 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 RNU6-489P-201ENST00000618289 107 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AL512427.1-201ENST00000618593 349 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC126544.2-201ENST00000625174 749 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 AC068620.4-201ENST00000636730 1182 ntBASIC4.4□□□□□ -1.71
VPS33AQ96AX1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS33AQ96AX1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms