Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC025884.1-201ENST00000556034 378 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 MIR4716-201ENST00000579628 84 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC110743.1-201ENST00000584870 478 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 SNX6P1-201ENST00000601728 1224 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC083899.3-201ENST00000603413 594 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AL713922.2-201ENST00000619384 716 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC124312.6-202ENST00000623624 418 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AL627171.1-201ENST00000618845 1308 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC016588.2-201ENST00000632484 3021 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 EXOC5P1-201ENST00000510543 1969 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 RNU6-386P-201ENST00000362650 107 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 DHFRP5-201ENST00000406944 564 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 UBE2V2P3-201ENST00000433562 437 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AL356276.2-201ENST00000435919 558 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC117525.1-201ENST00000515228 503 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC091516.1-201ENST00000549191 703 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC107016.1-201ENST00000550463 337 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AL049874.4-201ENST00000557593 255 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AGGF1P8-201ENST00000562979 1000 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AC009101.1-201ENST00000568135 242 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 MIR6868-201ENST00000611215 58 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 AL359715.5-201ENST00000623431 443 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 MIR492-201ENST00000638676 116 ntBASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC65Q8IXS2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 RNA5SP130-201ENST00000364431 114 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 RNU4-7P-201ENST00000364758 141 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 SNORA62-201ENST00000365493 153 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 SNORA70C-201ENST00000384538 135 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 MT-TP-201ENST00000387461 68 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AL022722.2-201ENST00000402519 180 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 RNU6-564P-201ENST00000410983 104 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC115285.1-201ENST00000424879 736 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 HIGD1AP4-201ENST00000430194 280 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 MTCO1P45-201ENST00000431457 267 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 PPIAP17-201ENST00000438507 471 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC069277.2-201ENST00000454211 432 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 RPL7P19-201ENST00000469948 618 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 RNU4-89P-201ENST00000607443 133 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AC023043.4-201ENST00000612081 449 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 AL591424.2-201ENST00000617023 128 ntBASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC65Q8IXS2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 CASC19-261ENST00000641853 1638 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms