Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 MIR432-201ENST00000606207 94 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC011755.1-201ENST00000623763 2049 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 SNORD96B-201ENST00000386148 79 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 RAB28P3-201ENST00000448325 597 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC138409.2-202ENST00000507274 458 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 MIR4524B-201ENST00000581569 115 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AL162274.2-201ENST00000614406 332 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC068870.3-201ENST00000625077 2536 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC007823.1-201ENST00000569932 1566 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AL669831.5-218ENST00000591702 1873 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC083843.3-201ENST00000623679 2186 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AL133268.1-201ENST00000405676 1401 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 RPL5P18-201ENST00000406671 891 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AL024507.1-201ENST00000412741 274 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 RPL7P59-201ENST00000447700 943 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 MTND6P32-201ENST00000457611 483 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 UBE2NP1-201ENST00000545592 458 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 IGHV3-29-201ENST00000604817 344 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AP001153.1-201ENST00000641024 338 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 RPF2P1-201ENST00000424137 906 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 OR52Y1P-201ENST00000452418 828 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AL390816.3-201ENST00000604527 1066 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 AC064801.1-201ENST00000612025 407 ntBASIC3.63□□□□□ -1.83
RIF1Q5UIP0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RIF1Q5UIP0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 RN7SKP186-201ENST00000365371 303 ntBASIC3.62□□□□□ -1.83
RIF1Q5UIP0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 AL137790.1-201ENST00000634283 177 ntBASIC3.62□□□□□ -1.83
RIF1Q5UIP0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 AC003685.2-201ENST00000422795 395 ntBASIC3.62□□□□□ -1.83
RIF1Q5UIP0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 PRELID3BP3-201ENST00000584963 545 ntBASIC3.62□□□□□ -1.83
RIF1Q5UIP0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RIF1Q5UIP0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC073136.1-201ENST00000449426 2884 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms