Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC073850.1-201ENST00000449243 255 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL691482.1-201ENST00000453255 87 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 PNPLA4P1-201ENST00000458328 305 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC026348.1-201ENST00000462549 1053 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC108734.3-201ENST00000481241 1165 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 RPSAP50-201ENST00000481955 852 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC020890.1-201ENST00000491837 504 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CL1P78423 MTATP6P22-201ENST00000507369 598 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 SNORD116-26-201ENST00000516006 96 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 RNA5SP43-201ENST00000516559 110 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 RPL23AP53-201ENST00000521854 457 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC023538.1-201ENST00000534576 736 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC022662.1-201ENST00000580252 331 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AP003392.5-201ENST00000607857 415 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 AL627230.1-201ENST00000613077 211 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 EIF3FP1-201ENST00000613970 806 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC009464.1-201ENST00000615731 469 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL591926.8-201ENST00000616876 211 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL355493.4-201ENST00000618530 292 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AP002782.1-201ENST00000623107 614 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.96□□□□□ -1.78
CX3CL1P78423 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC093535.2-201ENST00000624769 2326 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CL1P78423 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.96□□□□□ -1.78
CX3CL1P78423 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 Z95327.2-201ENST00000414579 1873 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CX3CL1P78423 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC109315.1-201ENST00000584143 1347 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.95□□□□□ -1.78
CX3CL1P78423 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 RNA5SP305-201ENST00000362665 119 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 SNORA73.1-201ENST00000363107 205 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 RNA5SP507-201ENST00000363603 121 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 Y_RNA.192-201ENST00000363977 102 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 RN7SKP224-201ENST00000364140 325 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 Y_RNA.465-201ENST00000384293 102 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 RNU6-83P-201ENST00000384568 112 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AL078604.1-201ENST00000404609 466 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 NRBF2P2-201ENST00000413087 861 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.95□□□□□ -1.78
CX3CL1P78423 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.95□□□□□ -1.78
CX3CL1P78423 BOLA3P4-201ENST00000418151 400 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 RPL30P3-201ENST00000424262 333 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AL138785.1-201ENST00000425821 331 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC092447.3-201ENST00000426027 686 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC007559.1-201ENST00000428736 355 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 IFNNP1-201ENST00000429219 553 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 FABP7P2-201ENST00000429946 379 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AL627308.1-201ENST00000435693 821 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 COX7BP2-201ENST00000437976 242 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 FGF7P5-201ENST00000441829 291 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AL137845.2-201ENST00000444292 988 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.95□□□□□ -1.78
CX3CL1P78423 HMGB3P21-201ENST00000452483 547 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 NDUFA5P7-201ENST00000452914 242 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 RFC5P1-201ENST00000454419 874 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 APOOP2-201ENST00000461561 539 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 RN7SL319P-201ENST00000480656 221 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AC110792.2-201ENST00000510278 224 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms