Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
LSM3P62310 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM3P62310 AC068533.1-201ENST00000418542 415 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AL691449.1-201ENST00000426570 421 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM3P62310 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 RPL12P26-201ENST00000452430 487 ntBASIC3.23□□□□□ -1.89
LSM3P62310 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.23□□□□□ -1.89
LSM3P62310 AC037198.2-201ENST00000478845 733 ntBASIC3.23□□□□□ -1.89
LSM3P62310 RPL23AP44-201ENST00000482216 473 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM3P62310 AC114967.1-201ENST00000504890 259 ntBASIC3.23□□□□□ -1.89
LSM3P62310 TXNP6-201ENST00000510190 310 ntBASIC3.23□□□□□ -1.89
LSM3P62310 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.23□□□□□ -1.89
LSM3P62310 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC093331.1-201ENST00000521474 169 ntBASIC3.23□□□□□ -1.89
LSM3P62310 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.23□□□□□ -1.89
LSM3P62310 AC004024.1-201ENST00000549244 247 ntBASIC3.23□□□□□ -1.89
LSM3P62310 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 AC073429.2-201ENST00000569694 1444 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM3P62310 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.23□□□□□ -1.89
LSM3P62310 AC017076.1-201ENST00000607613 578 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC004241.3-201ENST00000611728 517 ntBASIC3.23□□□□□ -1.89
LSM3P62310 MIR6826-201ENST00000617808 98 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC011944.2-201ENST00000624440 683 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC010608.2-201ENST00000624830 470 ntBASIC3.23□□□□□ -1.89
LSM3P62310 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 EXOC5P1-201ENST00000510543 1969 ntBASIC3.23□□□□□ -1.89
LSM3P62310 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM3P62310 AL132640.2-201ENST00000559968 1698 ntBASIC3.23□□□□□ -1.89
LSM3P62310 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM3P62310 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM3P62310 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LSM3P62310 Z73965.1-201ENST00000623412 2297 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM3P62310 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM3P62310 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM3P62310 SNORA73.2-201ENST00000364946 201 ntBASIC3.22□□□□□ -1.89
LSM3P62310 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
LSM3P62310 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LSM3P62310 SOD2P1-201ENST00000396543 562 ntBASIC3.22□□□□□ -1.89
LSM3P62310 SKINT1L-201ENST00000401057 817 ntBASIC3.22□□□□□ -1.89
LSM3P62310 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
LSM3P62310 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AC108032.1-201ENST00000416706 207 ntBASIC3.22□□□□□ -1.89
LSM3P62310 GTF2IP23-201ENST00000423746 351 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM3P62310 RWDD4P2-201ENST00000426392 563 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AL360081.1-201ENST00000428299 555 ntBASIC3.22□□□□□ -1.89
LSM3P62310 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM3P62310 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM3P62310 AC073264.2-201ENST00000448886 166 ntBASIC3.22□□□□□ -1.89
LSM3P62310 EIF4A1P11-201ENST00000451239 222 ntBASIC3.22□□□□□ -1.89
LSM3P62310 RN7SL177P-201ENST00000476596 299 ntBASIC3.22□□□□□ -1.89
LSM3P62310 RPS3AP6-201ENST00000484430 795 ntBASIC3.22□□□□□ -1.89
LSM3P62310 RWDD4P1-201ENST00000488019 565 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AC105233.1-201ENST00000498840 781 ntBASIC3.22□□□□□ -1.89
LSM3P62310 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
LSM3P62310 AC111000.3-201ENST00000508057 576 ntBASIC3.22□□□□□ -1.89
LSM3P62310 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
LSM3P62310 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM3P62310 RNU6-943P-201ENST00000516960 98 ntBASIC3.22□□□□□ -1.89
LSM3P62310 RN7SKP92-201ENST00000517266 244 ntBASIC3.22□□□□□ -1.89
LSM3P62310 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM3P62310 AC025260.1-201ENST00000548858 430 ntBASIC3.22□□□□□ -1.89
LSM3P62310 PSMB7P1-201ENST00000556349 514 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AC090888.3-201ENST00000558917 509 ntBASIC3.22□□□□□ -1.89
LSM3P62310 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.22□□□□□ -1.89
LSM3P62310 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.22□□□□□ -1.89
LSM3P62310 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM3P62310 MIR4436B2-201ENST00000581415 91 ntBASIC3.22□□□□□ -1.89
LSM3P62310 MIR4436B1-201ENST00000583272 91 ntBASIC3.22□□□□□ -1.89
LSM3P62310 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.22□□□□□ -1.89
LSM3P62310 AC020915.5-201ENST00000596836 964 ntBASIC3.22□□□□□ -1.89
LSM3P62310 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LSM3P62310 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LSM3P62310 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM3P62310 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM3P62310 CDY3P-201ENST00000454543 1618 ntBASIC3.22□□□□□ -1.89
LSM3P62310 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LSM3P62310 AC066616.2-201ENST00000559334 1481 ntBASIC3.22□□□□□ -1.89
LSM3P62310 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.22□□□□□ -1.89
LSM3P62310 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LSM3P62310 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.21□□□□□ -1.89
LSM3P62310 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM3P62310 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM3P62310 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM3P62310 AL592494.2-201ENST00000425455 1548 ntBASIC3.21□□□□□ -1.9
LSM3P62310 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM3P62310 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM3P62310 RNA5SP97-201ENST00000365006 84 ntBASIC3.21□□□□□ -1.9
LSM3P62310 U1.1-201ENST00000384101 164 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms