Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC016027.5-201ENST00000427227 210 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RPS29P14-201ENST00000431518 171 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 MTND3P23-201ENST00000431980 347 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 USP12PX-201ENST00000432383 1057 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AL445928.1-201ENST00000435545 222 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 RPL10P17-201ENST00000453852 316 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC023598.1-201ENST00000472521 361 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RPSAP51-201ENST00000497462 645 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 AC008629.2-201ENST00000503783 483 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC008945.1-201ENST00000505144 499 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-714P-201ENST00000516963 103 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 AP003080.1-202ENST00000526526 915 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC090424.1-201ENST00000535243 736 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC012146.2-201ENST00000576545 416 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC005730.3-201ENST00000583067 366 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC011816.2-201ENST00000607089 556 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC123768.4-201ENST00000616244 701 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-156P-201ENST00000621869 107 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC022140.2-201ENST00000623500 188 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC099654.5-201ENST00000636479 350 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC099654.6-201ENST00000636487 512 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 HSPA8P14-201ENST00000552265 1805 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 AP000756.2-201ENST00000624168 2567 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AL049780.3-201ENST00000624612 1583 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
GFRA1P56159 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GFRA1P56159 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 RNU6-1090P-201ENST00000364065 94 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 RNU6-876P-201ENST00000391295 104 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 RPL7P25-201ENST00000404151 721 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AC069218.2-201ENST00000411665 344 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 USP9YP27-201ENST00000418455 438 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 RPS3P2-201ENST00000421346 701 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL035660.1-201ENST00000422041 222 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC012498.1-201ENST00000424037 437 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 AL589872.1-201ENST00000426602 288 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 FAM103A2P-201ENST00000444122 354 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 EEF1A1P1-201ENST00000447052 739 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC011476.1-201ENST00000466725 307 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 RPL35P6-201ENST00000490024 372 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL035690.1-201ENST00000490892 383 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AC069439.1-201ENST00000494739 167 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 RPL30P11-201ENST00000495304 339 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC114781.3-201ENST00000512083 142 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms