Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
COPAP53621 AC006210.2-201ENST00000367074 1545 ntBASIC5.16□□□□□ -1.58
COPAP53621 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
COPAP53621 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COPAP53621 Z73965.1-201ENST00000623412 2297 ntBASIC5.16□□□□□ -1.58
COPAP53621 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
COPAP53621 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COPAP53621 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COPAP53621 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
COPAP53621 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COPAP53621 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
COPAP53621 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
COPAP53621 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COPAP53621 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.15□□□□□ -1.58
COPAP53621 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COPAP53621 RNVU1-6-201ENST00000364688 164 ntBASIC5.15□□□□□ -1.59
COPAP53621 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COPAP53621 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPAP53621 RPL26P29-201ENST00000415623 438 ntBASIC5.15□□□□□ -1.59
COPAP53621 MTND2P18-201ENST00000419962 1030 ntBASIC5.15□□□□□ -1.59
COPAP53621 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 COX7BP2-201ENST00000437976 242 ntBASIC5.15□□□□□ -1.59
COPAP53621 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.15□□□□□ -1.59
COPAP53621 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 AC104306.1-201ENST00000449702 371 ntBASIC5.15□□□□□ -1.59
COPAP53621 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.15□□□□□ -1.59
COPAP53621 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 RPL5P30-201ENST00000465511 891 ntBASIC5.15□□□□□ -1.59
COPAP53621 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.15□□□□□ -1.59
COPAP53621 RN7SL244P-201ENST00000493405 297 ntBASIC5.15□□□□□ -1.59
COPAP53621 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COPAP53621 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 HMGB3P16-201ENST00000508037 287 ntBASIC5.15□□□□□ -1.59
COPAP53621 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.15□□□□□ -1.59
COPAP53621 AC090819.1-201ENST00000523800 1111 ntBASIC5.15□□□□□ -1.59
COPAP53621 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COPAP53621 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 OR4C2P-201ENST00000530855 1064 ntBASIC5.15□□□□□ -1.59
COPAP53621 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.15□□□□□ -1.59
COPAP53621 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.15□□□□□ -1.59
COPAP53621 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 AC137768.1-201ENST00000549998 553 ntBASIC5.15□□□□□ -1.59
COPAP53621 CR383656.6-201ENST00000550518 394 ntBASIC5.15□□□□□ -1.59
COPAP53621 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.15□□□□□ -1.59
COPAP53621 AL354943.1-201ENST00000572103 781 ntBASIC5.15□□□□□ -1.59
COPAP53621 MIR4512-201ENST00000583257 77 ntBASIC5.15□□□□□ -1.59
COPAP53621 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 AL031320.1-201ENST00000604177 357 ntBASIC5.15□□□□□ -1.59
COPAP53621 DPRXP5-201ENST00000604662 539 ntBASIC5.15□□□□□ -1.59
COPAP53621 AP003392.5-201ENST00000607857 415 ntBASIC5.15□□□□□ -1.59
COPAP53621 AL355816.1-201ENST00000607951 118 ntBASIC5.15□□□□□ -1.59
COPAP53621 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.15□□□□□ -1.59
COPAP53621 AP000255.1-201ENST00000610276 676 ntBASIC5.15□□□□□ -1.59
COPAP53621 AC022509.4-201ENST00000621404 572 ntBASIC5.15□□□□□ -1.59
COPAP53621 CR392039.4-201ENST00000624968 501 ntBASIC5.15□□□□□ -1.59
COPAP53621 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 MIR1322-201ENST00000638013 71 ntBASIC5.15□□□□□ -1.59
COPAP53621 OR2L1P-202ENST00000641567 1023 ntBASIC5.15□□□□□ -1.59
COPAP53621 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
COPAP53621 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COPAP53621 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.15□□□□□ -1.59
COPAP53621 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPAP53621 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.15□□□□□ -1.59
COPAP53621 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPAP53621 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COPAP53621 AC012618.3-205ENST00000637896 1496 ntBASIC5.14□□□□□ -1.59
COPAP53621 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPAP53621 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPAP53621 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPAP53621 FAM133CP-201ENST00000332869 704 ntBASIC5.14□□□□□ -1.59
COPAP53621 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.14□□□□□ -1.59
COPAP53621 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPAP53621 SNORD116-8-201ENST00000384365 95 ntBASIC5.14□□□□□ -1.59
COPAP53621 RNU6-83P-201ENST00000384568 112 ntBASIC5.14□□□□□ -1.59
COPAP53621 SNORA66-201ENST00000384792 133 ntBASIC5.14□□□□□ -1.59
COPAP53621 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPAP53621 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.14□□□□□ -1.59
COPAP53621 AC007435.1-201ENST00000421086 415 ntBASIC5.14□□□□□ -1.59
COPAP53621 DPRXP1-201ENST00000426312 460 ntBASIC5.14□□□□□ -1.59
COPAP53621 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.14□□□□□ -1.59
COPAP53621 RPL35AP21-201ENST00000437667 333 ntBASIC5.14□□□□□ -1.59
COPAP53621 AL008629.1-201ENST00000438615 184 ntBASIC5.14□□□□□ -1.59
COPAP53621 ATG12P2-201ENST00000456830 416 ntBASIC5.14□□□□□ -1.59
COPAP53621 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
COPAP53621 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.14□□□□□ -1.59
COPAP53621 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.14□□□□□ -1.59
COPAP53621 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms