Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 ATE1-AS1-202ENST00000636460 506 ntBASIC6.4□□□□□ -1.38
USP11P51784 U6.107-201ENST00000637108 79 ntBASIC6.4□□□□□ -1.38
USP11P51784 CRYM-AS1-204ENST00000637983 556 ntBASIC6.4□□□□□ -1.38
USP11P51784 MIR4302-201ENST00000638058 60 ntBASIC6.4□□□□□ -1.38
USP11P51784 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
USP11P51784 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USP11P51784 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USP11P51784 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USP11P51784 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USP11P51784 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USP11P51784 AC015799.1-201ENST00000622996 3122 ntBASIC6.4□□□□□ -1.39
USP11P51784 Z95114.1-201ENST00000624264 14574 ntBASIC6.4□□□□□ -1.39
USP11P51784 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 FRG1BP-201ENST00000278882 761 ntBASIC6.39□□□□□ -1.39
USP11P51784 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 FRG1CP-201ENST00000358464 769 ntBASIC6.39□□□□□ -1.39
USP11P51784 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 AC087752.1-201ENST00000391360 558 ntBASIC6.39□□□□□ -1.39
USP11P51784 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 AC005042.1-201ENST00000393397 800 ntBASIC6.39□□□□□ -1.39
USP11P51784 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 GSTA9P-201ENST00000406231 611 ntBASIC6.39□□□□□ -1.39
USP11P51784 AC096921.1-201ENST00000411661 375 ntBASIC6.39□□□□□ -1.39
USP11P51784 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 AC007390.1-201ENST00000415722 356 ntBASIC6.39□□□□□ -1.39
USP11P51784 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.39□□□□□ -1.39
USP11P51784 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.39□□□□□ -1.39
USP11P51784 CYCSP11-201ENST00000436426 315 ntBASIC6.39□□□□□ -1.39
USP11P51784 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 AC073909.1-201ENST00000447112 999 ntBASIC6.39□□□□□ -1.39
USP11P51784 DNAJC19P8-201ENST00000452887 259 ntBASIC6.39□□□□□ -1.39
USP11P51784 AC023141.9-201ENST00000458734 412 ntBASIC6.39□□□□□ -1.39
USP11P51784 SNORD125-201ENST00000459538 96 ntBASIC6.39□□□□□ -1.39
USP11P51784 AC092757.1-201ENST00000467293 467 ntBASIC6.39□□□□□ -1.39
USP11P51784 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.39□□□□□ -1.39
USP11P51784 HMGN1P13-201ENST00000505795 138 ntBASIC6.39□□□□□ -1.39
USP11P51784 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 NDUFB4P2-201ENST00000509515 391 ntBASIC6.39□□□□□ -1.39
USP11P51784 GAPDHP62-201ENST00000515313 990 ntBASIC6.39□□□□□ -1.39
USP11P51784 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 MTND1P35-201ENST00000526739 508 ntBASIC6.39□□□□□ -1.39
USP11P51784 OR4A45P-201ENST00000529954 901 ntBASIC6.39□□□□□ -1.39
USP11P51784 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.39□□□□□ -1.39
USP11P51784 AP003072.1-201ENST00000531740 145 ntBASIC6.39□□□□□ -1.39
USP11P51784 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 AL157687.1-201ENST00000554853 619 ntBASIC6.39□□□□□ -1.39
USP11P51784 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.39□□□□□ -1.39
USP11P51784 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.39□□□□□ -1.39
USP11P51784 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.39□□□□□ -1.39
USP11P51784 AL035413.2-201ENST00000604801 525 ntBASIC6.39□□□□□ -1.39
USP11P51784 AL050343.2-201ENST00000607338 280 ntBASIC6.39□□□□□ -1.39
USP11P51784 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 BX323046.1-201ENST00000610145 535 ntBASIC6.39□□□□□ -1.39
USP11P51784 AC090574.1-201ENST00000623186 233 ntBASIC6.39□□□□□ -1.39
USP11P51784 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.39□□□□□ -1.39
USP11P51784 AL691477.1-201ENST00000624398 162 ntBASIC6.39□□□□□ -1.39
USP11P51784 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.39□□□□□ -1.39
USP11P51784 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.39□□□□□ -1.39
USP11P51784 MTCO1P6-201ENST00000481192 1384 ntBASIC6.39□□□□□ -1.39
USP11P51784 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP11P51784 ICE2P1-201ENST00000512800 1849 ntBASIC6.39□□□□□ -1.39
USP11P51784 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.38□□□□□ -1.39
USP11P51784 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
USP11P51784 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP11P51784 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP11P51784 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP11P51784 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP11P51784 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP11P51784 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP11P51784 U3.10-201ENST00000364459 214 ntBASIC6.38□□□□□ -1.39
USP11P51784 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.38□□□□□ -1.39
USP11P51784 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
USP11P51784 Y_RNA.548-201ENST00000384656 105 ntBASIC6.38□□□□□ -1.39
USP11P51784 MIR217-201ENST00000384817 110 ntBASIC6.38□□□□□ -1.39
USP11P51784 RNU6-244P-201ENST00000391028 104 ntBASIC6.38□□□□□ -1.39
USP11P51784 AL009179.1-201ENST00000406085 265 ntBASIC6.38□□□□□ -1.39
USP11P51784 AL512422.1-201ENST00000407033 553 ntBASIC6.38□□□□□ -1.39
USP11P51784 MIR1284-201ENST00000408337 120 ntBASIC6.38□□□□□ -1.39
USP11P51784 OR6E1P-201ENST00000414424 923 ntBASIC6.38□□□□□ -1.39
USP11P51784 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.38□□□□□ -1.39
USP11P51784 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms