Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.77□□□□□ -1.65
HOXC8P31273 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
HOXC8P31273 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC8P31273 AL035405.1-201ENST00000400795 710 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 RPL31P52-201ENST00000407532 367 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXC8P31273 OR2AH1P-201ENST00000425717 928 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 RPEP2-201ENST00000432149 701 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC8P31273 HMGN1P5-201ENST00000448591 263 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 TVP23BP2-201ENST00000455082 615 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC8P31273 AP000942.1-201ENST00000463969 747 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 AC010683.1-201ENST00000473673 378 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC8P31273 AC093801.2-201ENST00000503966 1050 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HOXC8P31273 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC8P31273 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXC8P31273 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC8P31273 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC8P31273 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXC8P31273 AL121594.4-201ENST00000556211 1196 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC8P31273 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC8P31273 AC090312.1-201ENST00000580637 348 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 AC115085.1-201ENST00000588924 229 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC8P31273 AC091905.2-201ENST00000623143 306 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 FP325313.1-201ENST00000638228 703 ntBASIC4.77□□□□□ -1.65
HOXC8P31273 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXC8P31273 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC8P31273 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC8P31273 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HOXC8P31273 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 MIR16-2-201ENST00000362117 81 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 RNU6-609P-201ENST00000365459 107 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC019155.1-201ENST00000382242 574 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC025750.1-201ENST00000399891 379 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC069282.1-201ENST00000411911 526 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC234782.4-201ENST00000417646 1048 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC8P31273 UBE2D3P3-201ENST00000426992 425 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 MTCYBP32-201ENST00000427945 1084 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC005189.1-201ENST00000431286 310 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 MRPL50P1-201ENST00000431951 384 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC8P31273 AL356276.2-201ENST00000435919 558 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 RNFT1P2-201ENST00000443064 757 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 VN1R32P-201ENST00000452234 905 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC8P31273 RNA5SP246-201ENST00000458909 119 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 RPL35AP15-201ENST00000468042 339 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 UBA52P3-201ENST00000491303 382 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC8P31273 MTCO2P9-201ENST00000503214 694 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC020593.1-201ENST00000507399 299 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC8P31273 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC8P31273 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC8P31273 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC8P31273 OR5AK3P-201ENST00000527486 1297 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC006130.2-201ENST00000586202 326 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC8P31273 AC006116.7-201ENST00000590141 756 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC022916.3-201ENST00000592961 742 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 MTATP6P2-201ENST00000603319 678 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC8P31273 MIR8069-1-201ENST00000616627 86 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 MIR8069-2-201ENST00000621412 86 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AL138955.1-201ENST00000622881 1040 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 AC097460.3-201ENST00000623099 442 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC8P31273 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC8P31273 ASNSP1-204ENST00000641977 1664 ntBASIC4.76□□□□□ -1.65
HOXC8P31273 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HOXC8P31273 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC8P31273 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC8P31273 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC8P31273 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
HOXC8P31273 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC8P31273 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC8P31273 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HOXC8P31273 CYP1D1P-201ENST00000416662 1433 ntBASIC4.75□□□□□ -1.65
HOXC8P31273 MTCO1P18-201ENST00000455518 1419 ntBASIC4.75□□□□□ -1.65
HOXC8P31273 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC8P31273 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC8P31273 RNU1-20P-201ENST00000363314 162 ntBASIC4.75□□□□□ -1.65
HOXC8P31273 RNA5SP175-201ENST00000364275 119 ntBASIC4.75□□□□□ -1.65
HOXC8P31273 RNA5SP283-201ENST00000365604 119 ntBASIC4.75□□□□□ -1.65
HOXC8P31273 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC8P31273 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HOXC8P31273 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms