Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL031119.1-201ENST00000404707 1879 ntBASIC4.44□□□□□ -1.7
CDH3P22223 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH3P22223 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
CDH3P22223 RNU6-207P-201ENST00000384137 107 ntBASIC4.44□□□□□ -1.7
CDH3P22223 MIR141-201ENST00000384975 95 ntBASIC4.44□□□□□ -1.7
CDH3P22223 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.44□□□□□ -1.7
CDH3P22223 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH3P22223 AL355615.1-201ENST00000406187 641 ntBASIC4.44□□□□□ -1.7
CDH3P22223 VDAC1P9-201ENST00000412766 841 ntBASIC4.44□□□□□ -1.7
CDH3P22223 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH3P22223 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH3P22223 RPL23AP1-201ENST00000428990 471 ntBASIC4.44□□□□□ -1.7
CDH3P22223 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH3P22223 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH3P22223 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH3P22223 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.44□□□□□ -1.7
CDH3P22223 RPL7P48-201ENST00000461513 746 ntBASIC4.44□□□□□ -1.7
CDH3P22223 CEACAMP10-202ENST00000495431 496 ntBASIC4.44□□□□□ -1.7
CDH3P22223 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH3P22223 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH3P22223 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH3P22223 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH3P22223 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH3P22223 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CDH3P22223 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH3P22223 MIR4715-201ENST00000584117 79 ntBASIC4.44□□□□□ -1.7
CDH3P22223 RPL12P25-202ENST00000598100 674 ntBASIC4.44□□□□□ -1.7
CDH3P22223 AL158050.2-201ENST00000605336 568 ntBASIC4.44□□□□□ -1.7
CDH3P22223 AC020634.1-201ENST00000608701 549 ntBASIC4.44□□□□□ -1.7
CDH3P22223 OR2BH1P-201ENST00000608850 864 ntBASIC4.44□□□□□ -1.7
CDH3P22223 AP005019.3-201ENST00000620418 560 ntBASIC4.44□□□□□ -1.7
CDH3P22223 AP003497.2-201ENST00000624220 967 ntBASIC4.44□□□□□ -1.7
CDH3P22223 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH3P22223 AC099654.8-201ENST00000637757 681 ntBASIC4.44□□□□□ -1.7
CDH3P22223 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH3P22223 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
CDH3P22223 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH3P22223 AL645568.2-201ENST00000432815 1337 ntBASIC4.44□□□□□ -1.7
CDH3P22223 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH3P22223 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH3P22223 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 AL137100.1-201ENST00000556703 1620 ntBASIC4.43□□□□□ -1.7
CDH3P22223 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH3P22223 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH3P22223 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH3P22223 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH3P22223 IGKV7-3-201ENST00000357453 298 ntBASIC4.43□□□□□ -1.7
CDH3P22223 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
CDH3P22223 MIR122-201ENST00000385044 85 ntBASIC4.43□□□□□ -1.7
CDH3P22223 RNA5SP239-201ENST00000410218 129 ntBASIC4.43□□□□□ -1.7
CDH3P22223 HMGB3P31-201ENST00000413333 595 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC105402.1-201ENST00000413336 545 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH3P22223 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH3P22223 HSFY1P1-201ENST00000423928 1178 ntBASIC4.43□□□□□ -1.7
CDH3P22223 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.43□□□□□ -1.7
CDH3P22223 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.43□□□□□ -1.7
CDH3P22223 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH3P22223 RPS27AP16-201ENST00000492222 470 ntBASIC4.43□□□□□ -1.7
CDH3P22223 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH3P22223 AC092593.2-201ENST00000513866 913 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH3P22223 AC023825.1-201ENST00000566704 1030 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 MIR4458-201ENST00000578872 75 ntBASIC4.43□□□□□ -1.7
CDH3P22223 MIR548Y-201ENST00000582739 110 ntBASIC4.43□□□□□ -1.7
CDH3P22223 MIR5096-201ENST00000583713 70 ntBASIC4.43□□□□□ -1.7
CDH3P22223 RN7SL622P-201ENST00000585292 275 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC008507.2-201ENST00000588402 1176 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 AC011492.1-201ENST00000600023 315 ntBASIC4.43□□□□□ -1.7
CDH3P22223 AC026790.2-201ENST00000606282 430 ntBASIC4.43□□□□□ -1.7
CDH3P22223 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH3P22223 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH3P22223 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CDH3P22223 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH3P22223 AL391684.1-202ENST00000641293 1636 ntBASIC4.43□□□□□ -1.7
CDH3P22223 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH3P22223 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH3P22223 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CDH3P22223 MFSD8-242ENST00000641690 4199 ntBASIC4.42□□□□□ -1.7
CDH3P22223 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH3P22223 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH3P22223 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH3P22223 METTL21EP-201ENST00000298105 713 ntBASIC4.42□□□□□ -1.7
CDH3P22223 AC021146.4-201ENST00000309229 279 ntBASIC4.42□□□□□ -1.7
CDH3P22223 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH3P22223 AP002784.2-201ENST00000397300 549 ntBASIC4.42□□□□□ -1.7
CDH3P22223 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH3P22223 AL603766.1-201ENST00000407763 664 ntBASIC4.42□□□□□ -1.7
CDH3P22223 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms