Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 GUCY1B2-204ENST00000531898 1979 ntBASIC5.47□□□□□ -1.53
ATF4P18848 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATF4P18848 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ATF4P18848 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ATF4P18848 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
ATF4P18848 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.46□□□□□ -1.54
ATF4P18848 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ATF4P18848 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 RNA5SP453-201ENST00000362503 119 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNU6-1097P-201ENST00000363586 107 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNA5SP260-201ENST00000363849 111 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNU4-1-201ENST00000363925 141 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNU6-1090P-201ENST00000364065 94 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNU5A-8P-201ENST00000364102 114 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNU6-1322P-201ENST00000364309 107 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNU6-1078P-201ENST00000364522 103 ntBASIC5.46□□□□□ -1.54
ATF4P18848 Y_RNA.295-201ENST00000364918 102 ntBASIC5.46□□□□□ -1.54
ATF4P18848 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 RNU6-877P-201ENST00000383868 107 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNA5SP187-201ENST00000384400 119 ntBASIC5.46□□□□□ -1.54
ATF4P18848 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 RNA5SP56-201ENST00000410277 118 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 MTATP6P18-201ENST00000417994 673 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AL139413.1-201ENST00000421309 217 ntBASIC5.46□□□□□ -1.54
ATF4P18848 FABP7P1-201ENST00000424004 391 ntBASIC5.46□□□□□ -1.54
ATF4P18848 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.46□□□□□ -1.54
ATF4P18848 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.46□□□□□ -1.54
ATF4P18848 BTF3P10-201ENST00000433415 495 ntBASIC5.46□□□□□ -1.54
ATF4P18848 GPR143P-201ENST00000434155 205 ntBASIC5.46□□□□□ -1.54
ATF4P18848 HMGB1P31-201ENST00000437242 427 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 RPL23AP33-201ENST00000442301 452 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RPS7P4-201ENST00000444127 582 ntBASIC5.46□□□□□ -1.54
ATF4P18848 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.46□□□□□ -1.54
ATF4P18848 AL590399.6-201ENST00000446396 307 ntBASIC5.46□□□□□ -1.54
ATF4P18848 MTND3P10-201ENST00000450967 341 ntBASIC5.46□□□□□ -1.54
ATF4P18848 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 AC022364.2-201ENST00000457963 554 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RPS26P11-201ENST00000463445 348 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RN7SL189P-201ENST00000468631 289 ntBASIC5.46□□□□□ -1.54
ATF4P18848 UBA52P7-201ENST00000486088 380 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RN7SL797P-201ENST00000486314 297 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RN7SL591P-201ENST00000496150 292 ntBASIC5.46□□□□□ -1.54
ATF4P18848 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.46□□□□□ -1.54
ATF4P18848 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.46□□□□□ -1.54
ATF4P18848 AC011352.2-201ENST00000514574 1016 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RNA5SP337-201ENST00000517007 109 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.46□□□□□ -1.54
ATF4P18848 IGLV1-62-201ENST00000518003 441 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.46□□□□□ -1.54
ATF4P18848 MTND1P35-201ENST00000526739 508 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.46□□□□□ -1.54
ATF4P18848 AC087257.2-201ENST00000538759 928 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.46□□□□□ -1.54
ATF4P18848 AL121579.1-201ENST00000555129 305 ntBASIC5.46□□□□□ -1.54
ATF4P18848 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 AC009117.1-201ENST00000563948 554 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 AL669831.4-202ENST00000590817 238 ntBASIC5.46□□□□□ -1.54
ATF4P18848 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.46□□□□□ -1.54
ATF4P18848 RPSAP66-201ENST00000592196 606 ntBASIC5.46□□□□□ -1.54
ATF4P18848 RPL12P25-202ENST00000598100 674 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC025857.2-201ENST00000602711 238 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AL078624.2-201ENST00000605063 554 ntBASIC5.46□□□□□ -1.54
ATF4P18848 AC007038.2-201ENST00000608095 740 ntBASIC5.46□□□□□ -1.54
ATF4P18848 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 uc_338.12-201ENST00000616344 181 ntBASIC5.46□□□□□ -1.54
ATF4P18848 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.46□□□□□ -1.54
ATF4P18848 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.46□□□□□ -1.54
ATF4P18848 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 AC125232.1-201ENST00000452554 1408 ntBASIC5.46□□□□□ -1.54
ATF4P18848 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.46□□□□□ -1.54
ATF4P18848 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATF4P18848 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 AL161756.3-201ENST00000641216 2071 ntBASIC5.46□□□□□ -1.54
ATF4P18848 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATF4P18848 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms