Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AC041039.1-201ENST00000485656 536 ntBASIC3.93□□□□□ -1.78
SDC1P18827 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
SDC1P18827 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.93□□□□□ -1.78
SDC1P18827 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.93□□□□□ -1.78
SDC1P18827 KRT19P6-201ENST00000510983 209 ntBASIC3.93□□□□□ -1.78
SDC1P18827 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.93□□□□□ -1.78
SDC1P18827 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 OR4R2P-201ENST00000530815 597 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.93□□□□□ -1.78
SDC1P18827 TVP23BP1-201ENST00000557500 617 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC018552.3-201ENST00000567416 561 ntBASIC3.93□□□□□ -1.78
SDC1P18827 MTND4LP25-201ENST00000570218 163 ntBASIC3.93□□□□□ -1.78
SDC1P18827 RPL23AP87-202ENST00000573039 466 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.93□□□□□ -1.78
SDC1P18827 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.93□□□□□ -1.78
SDC1P18827 PSMA6P4-201ENST00000603247 718 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC104662.1-201ENST00000604448 511 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC018618.2-201ENST00000604770 446 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC114878.2-201ENST00000604863 1251 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC026368.1-201ENST00000614934 690 ntBASIC3.93□□□□□ -1.78
SDC1P18827 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.93□□□□□ -1.78
SDC1P18827 AP000346.3-201ENST00000622821 210 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.93□□□□□ -1.78
SDC1P18827 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.93□□□□□ -1.78
SDC1P18827 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
SDC1P18827 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
SDC1P18827 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.93□□□□□ -1.78
SDC1P18827 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDC1P18827 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SDC1P18827 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.92□□□□□ -1.78
SDC1P18827 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 RNA5SP513-201ENST00000364648 118 ntBASIC3.92□□□□□ -1.78
SDC1P18827 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 ATP5F1P6-201ENST00000402768 767 ntBASIC3.92□□□□□ -1.78
SDC1P18827 RN7SKP182-201ENST00000410772 298 ntBASIC3.92□□□□□ -1.78
SDC1P18827 FAR2P2-201ENST00000413041 594 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AL158050.1-201ENST00000416077 457 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AC023128.2-201ENST00000420880 1223 ntBASIC3.92□□□□□ -1.78
SDC1P18827 RPL12P34-201ENST00000424532 479 ntBASIC3.92□□□□□ -1.78
SDC1P18827 MED6P1-201ENST00000439659 713 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AC006011.1-201ENST00000442758 349 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.92□□□□□ -1.78
SDC1P18827 AL451050.1-201ENST00000450126 415 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.92□□□□□ -1.78
SDC1P18827 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.92□□□□□ -1.78
SDC1P18827 AC007686.1-201ENST00000488511 463 ntBASIC3.92□□□□□ -1.78
SDC1P18827 RPS6P4-201ENST00000494693 758 ntBASIC3.92□□□□□ -1.78
SDC1P18827 RPL31P61-201ENST00000496160 376 ntBASIC3.92□□□□□ -1.78
SDC1P18827 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.92□□□□□ -1.78
SDC1P18827 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.92□□□□□ -1.78
SDC1P18827 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.92□□□□□ -1.78
SDC1P18827 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.92□□□□□ -1.78
SDC1P18827 SNORA26.10-201ENST00000516427 141 ntBASIC3.92□□□□□ -1.78
SDC1P18827 RNU7-143P-201ENST00000516781 65 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.92□□□□□ -1.78
SDC1P18827 MTND1P6-201ENST00000523621 946 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AP002812.4-201ENST00000532139 286 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.92□□□□□ -1.78
SDC1P18827 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.92□□□□□ -1.78
SDC1P18827 AC106785.3-201ENST00000564064 847 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.92□□□□□ -1.78
SDC1P18827 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.92□□□□□ -1.78
SDC1P18827 ZNF92P3-201ENST00000596594 954 ntBASIC3.92□□□□□ -1.78
SDC1P18827 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 AC090246.1-201ENST00000616499 426 ntBASIC3.92□□□□□ -1.78
SDC1P18827 AC106730.3-201ENST00000624568 641 ntBASIC3.92□□□□□ -1.78
SDC1P18827 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.92□□□□□ -1.78
SDC1P18827 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.92□□□□□ -1.78
SDC1P18827 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SDC1P18827 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDC1P18827 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
SDC1P18827 RNF6P1-201ENST00000444889 1784 ntBASIC3.91□□□□□ -1.78
SDC1P18827 AC116667.1-201ENST00000604855 2072 ntBASIC3.91□□□□□ -1.78
SDC1P18827 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SDC1P18827 AC096656.1-201ENST00000623826 1364 ntBASIC3.91□□□□□ -1.78
SDC1P18827 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.91□□□□□ -1.78
SDC1P18827 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 PHKBP1-201ENST00000450951 1951 ntBASIC3.91□□□□□ -1.78
SDC1P18827 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 OR4K17-201ENST00000315543 1032 ntBASIC3.91□□□□□ -1.78
SDC1P18827 RNA5SP509-201ENST00000364577 119 ntBASIC3.91□□□□□ -1.78
SDC1P18827 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDC1P18827 RNU6-98P-201ENST00000384173 107 ntBASIC3.91□□□□□ -1.78
SDC1P18827 AL161909.1-201ENST00000397390 712 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms