Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC4P09017 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC4P09017 EIF1AXP2-201ENST00000555940 413 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 CYP4A43P-201ENST00000568156 121 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC4P09017 AL121834.1-201ENST00000572284 509 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 RN7SL703P-201ENST00000578485 302 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC005255.1-201ENST00000593748 216 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC100814.1-201ENST00000606963 623 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AC090912.3-201ENST00000609775 533 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AC016911.1-201ENST00000613297 452 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 AC034229.5-201ENST00000624258 185 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 MIR6715B-201ENST00000637172 77 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 SPATA2P1-201ENST00000431223 2055 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
HOXC4P09017 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HOXC4P09017 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC134882.1-201ENST00000603738 1676 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC4P09017 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC4P09017 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.77
HOXC4P09017 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
HOXC4P09017 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC4P09017 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HOXC4P09017 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC4P09017 AC090971.4-201ENST00000560291 1800 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HOXC4P09017 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
HOXC4P09017 SNORD35B-201ENST00000363660 87 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 RNU6-225P-201ENST00000384613 103 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC4P09017 AL034374.1-201ENST00000406329 351 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 RNU4-6P-201ENST00000410804 122 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC4P09017 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC4P09017 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HOXC4P09017 AL391219.1-201ENST00000422570 483 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 HMGB3P5-201ENST00000428894 612 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 DYNLL1P7-201ENST00000429273 258 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 CACYBPP1-201ENST00000438592 684 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 EIF2S2P4-201ENST00000461070 984 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC021205.1-201ENST00000468797 348 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 OR52A4P-202ENST00000481634 799 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC4P09017 AC017037.1-201ENST00000508460 471 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC4P09017 IGLV3-26-201ENST00000520756 302 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC4P09017 YPEL5P3-201ENST00000547227 352 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXC4P09017 SNRPGP1-201ENST00000553864 222 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC4P09017 AC022968.1-201ENST00000567372 442 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC007599.1-201ENST00000568688 1174 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC079171.1-201ENST00000568788 914 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC4P09017 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AL592436.1-201ENST00000605135 558 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AL031666.3-201ENST00000609320 1006 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AL354696.1-201ENST00000614652 497 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AC107905.1-201ENST00000616204 426 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 AL109620.1-201ENST00000618738 1197 ntBASIC3.96□□□□□ -1.78
HOXC4P09017 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC4P09017 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC4P09017 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC4P09017 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HOXC4P09017 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 AC093311.1-201ENST00000506586 2021 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 MAPK10-372ENST00000641954 3413 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HOXC4P09017 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC4P09017 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXC4P09017 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC4P09017 PHKBP1-201ENST00000450951 1951 ntBASIC3.95□□□□□ -1.78
HOXC4P09017 RNU6-386P-201ENST00000362650 107 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms