Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC127537.2-201ENST00000439258 465 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 RPL32P28-201ENST00000443577 397 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 RSL24D1P3-201ENST00000449255 495 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.48□□□□□ -1.85
SPTA1P02549 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.48□□□□□ -1.85
SPTA1P02549 AC124068.1-201ENST00000563131 678 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.48□□□□□ -1.85
SPTA1P02549 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.48□□□□□ -1.85
SPTA1P02549 IMMP1LP1-201ENST00000605170 488 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 MIR432-201ENST00000606207 94 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 AC064801.1-201ENST00000612025 407 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 AL161912.2-201ENST00000565707 3007 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SPTA1P02549 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SPTA1P02549 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SPTA1P02549 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.47□□□□□ -1.85
SPTA1P02549 RN7SKP186-201ENST00000365371 303 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.47□□□□□ -1.85
SPTA1P02549 AC005326.1-201ENST00000429197 123 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.47□□□□□ -1.85
SPTA1P02549 AL591503.2-201ENST00000442314 1005 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.47□□□□□ -1.85
SPTA1P02549 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.47□□□□□ -1.85
SPTA1P02549 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.47□□□□□ -1.85
SPTA1P02549 AC128716.1-201ENST00000475129 166 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 AC010285.3-201ENST00000511668 676 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 AC087276.1-201ENST00000529659 480 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 MIR4524B-201ENST00000581569 115 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 AC133552.5-201ENST00000604266 540 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 MIR7111-201ENST00000619751 72 ntBASIC3.47□□□□□ -1.85
SPTA1P02549 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SPTA1P02549 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.47□□□□□ -1.85
SPTA1P02549 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.47□□□□□ -1.85
SPTA1P02549 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SPTA1P02549 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SPTA1P02549 RNA5SP51-201ENST00000364750 119 ntBASIC3.46□□□□□ -1.85
SPTA1P02549 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.46□□□□□ -1.85
SPTA1P02549 SRIP2-201ENST00000428470 166 ntBASIC3.46□□□□□ -1.85
SPTA1P02549 AC073063.1-201ENST00000434352 607 ntBASIC3.46□□□□□ -1.85
SPTA1P02549 AC104058.1-201ENST00000448028 297 ntBASIC3.46□□□□□ -1.85
SPTA1P02549 FAM172BP-201ENST00000487497 1089 ntBASIC3.46□□□□□ -1.85
SPTA1P02549 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.46□□□□□ -1.85
SPTA1P02549 RNU1-30P-201ENST00000606575 163 ntBASIC3.46□□□□□ -1.85
SPTA1P02549 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SPTA1P02549 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SPTA1P02549 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 AC126323.6-202ENST00000568092 3511 ntBASIC3.46□□□□□ -1.86
SPTA1P02549 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 Z97055.1-201ENST00000419730 712 ntBASIC3.46□□□□□ -1.86
SPTA1P02549 HIGD1AP4-201ENST00000430194 280 ntBASIC3.46□□□□□ -1.86
SPTA1P02549 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 AGGF1P3-201ENST00000493675 1213 ntBASIC3.46□□□□□ -1.86
SPTA1P02549 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.46□□□□□ -1.86
SPTA1P02549 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
SPTA1P02549 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.46□□□□□ -1.86
SPTA1P02549 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 AC011755.1-201ENST00000623763 2049 ntBASIC3.46□□□□□ -1.86
SPTA1P02549 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SPTA1P02549 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SPTA1P02549 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SPTA1P02549 AC083837.1-201ENST00000565297 2994 ntBASIC3.46□□□□□ -1.86
SPTA1P02549 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SPTA1P02549 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SPTA1P02549 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SPTA1P02549 LINC02471-203ENST00000641941 4752 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC010740.1-201ENST00000417035 684 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 OR2AH1P-201ENST00000425717 928 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 RPL23AP69-201ENST00000431134 458 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC083863.1-201ENST00000438811 231 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 AC009963.4-201ENST00000448535 339 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC011825.1-201ENST00000484967 388 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 RNU7-143P-201ENST00000516781 65 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.45□□□□□ -1.86
SPTA1P02549 CR383656.14-201ENST00000551951 406 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 NCAPGP2-201ENST00000557911 754 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 AL355365.1-201ENST00000616480 294 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AP001153.1-201ENST00000641024 338 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms