Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL035458.1-201ENST00000433096 585 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC008072.1-201ENST00000434254 824 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 VN1R54P-201ENST00000435210 1049 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 RPL23AP93-201ENST00000440847 484 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC007000.2-201ENST00000442564 487 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 MTND2P8-201ENST00000450555 1025 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 DNAJC19P1-201ENST00000455312 319 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 RPS20P4-201ENST00000461659 355 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC006511.1-201ENST00000470614 315 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 S100A11P1-201ENST00000477525 312 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC004069.2-201ENST00000505438 1114 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 KCTD9P2-201ENST00000512203 1013 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 CBX3P5-201ENST00000552017 521 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC063949.1-201ENST00000552900 865 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL121594.4-201ENST00000556211 1196 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC233266.2-201ENST00000567067 528 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC007599.1-201ENST00000568688 1174 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC091042.1-201ENST00000579213 173 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC020910.2-201ENST00000603635 610 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC098935.2-201ENST00000604222 466 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 MIR1264-201ENST00000616374 69 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC010435.1-201ENST00000623353 1177 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL353743.4-201ENST00000422653 1547 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL445437.1-201ENST00000623157 3087 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC009229.4-201ENST00000623854 1947 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 CEP170P1-201ENST00000502249 4587 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC006042.3-201ENST00000454684 1469 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 MIR298-201ENST00000401212 88 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AL109941.1-201ENST00000401925 229 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 RPL30P2-201ENST00000414021 291 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC006466.1-201ENST00000438721 289 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AL513321.1-201ENST00000441175 761 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 RPL31P44-201ENST00000447680 377 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 RPL7P22-201ENST00000466005 733 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC011037.1-201ENST00000483964 558 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 ATP1B1P1-201ENST00000509767 915 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 SMARCE1P4-201ENST00000523647 241 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AP002812.4-201ENST00000532139 286 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AL110118.1-201ENST00000553543 400 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 UBE2FP2-201ENST00000566646 462 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AL355816.1-201ENST00000607951 118 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 OR6R2P-201ENST00000609216 300 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 Mico1.1-201ENST00000611698 204 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 uc_338.32-201ENST00000615087 172 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC100827.5-201ENST00000615883 426 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AP006248.3-201ENST00000623580 594 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AP001784.1-201ENST00000624107 428 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC140479.6-201ENST00000633535 357 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms