Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC073387.1-201ENST00000453261 709 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC092691.2-201ENST00000461787 803 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 PPIAP21-201ENST00000464473 501 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 RPL21P47-201ENST00000483696 477 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 MRPS33P3-201ENST00000513456 322 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AC117532.1-201ENST00000514638 323 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AP000926.4-201ENST00000527351 454 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC103987.3-201ENST00000582071 292 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AC012213.4-201ENST00000606457 354 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 OR8B1P-202ENST00000641132 1178 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 AC007342.7-201ENST00000624610 2337 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 OR14L1P-202ENST00000641545 3009 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 ZFRP1-201ENST00000457579 2970 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AL592182.3-201ENST00000642132 3304 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.73□□□□□ -1.65
SMAD6O43541 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.73□□□□□ -1.65
SMAD6O43541 CASC19-206ENST00000641028 1430 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMAD6O43541 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMAD6O43541 AL136164.3-201ENST00000624429 3978 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC114546.3-201ENST00000623582 1734 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SMAD6O43541 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SMAD6O43541 OR4K15-201ENST00000305051 1216 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 MIR365B-201ENST00000362317 111 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 RNA5SP443-201ENST00000363083 132 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 RNU6-623P-201ENST00000363143 105 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 RNA5SP397-201ENST00000391323 118 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 TAF9BP2-201ENST00000400856 499 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SMAD6O43541 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.73□□□□□ -1.65
SMAD6O43541 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SMAD6O43541 OR6K4P-201ENST00000423179 955 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 PRELID3BP10-201ENST00000431957 584 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 BX119904.1-201ENST00000432026 348 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 AC118469.1-201ENST00000442943 488 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.73□□□□□ -1.65
SMAD6O43541 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 AL591473.1-201ENST00000464297 313 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC090142.1-201ENST00000465776 462 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC006463.2-201ENST00000473326 348 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC022336.1-201ENST00000475510 337 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.73□□□□□ -1.65
SMAD6O43541 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 HMGB3P16-201ENST00000508037 287 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 AF213884.2-201ENST00000510417 903 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 RN7SKP92-201ENST00000517266 244 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 MTCYBP19-201ENST00000517463 1124 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 DYNLL1P4-201ENST00000549314 266 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 MRPS35P3-201ENST00000603189 709 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AL353600.1-201ENST00000608148 251 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 AC022079.2-201ENST00000619739 566 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC022106.2-201ENST00000620114 757 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AL023881.1-201ENST00000621088 301 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 AC015871.5-202ENST00000623252 701 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 U3.53-201ENST00000628922 216 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms