Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN3O15551 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN3O15551 HNRNPCP4-201ENST00000571636 900 ntBASIC4.49□□□□□ -1.69
CLDN3O15551 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN3O15551 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN3O15551 AL355816.1-201ENST00000607951 118 ntBASIC4.49□□□□□ -1.69
CLDN3O15551 AC015813.4-201ENST00000610469 179 ntBASIC4.49□□□□□ -1.69
CLDN3O15551 AC068724.3-201ENST00000625906 87 ntBASIC4.49□□□□□ -1.69
CLDN3O15551 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN3O15551 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN3O15551 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN3O15551 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CLDN3O15551 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CLDN3O15551 USP9YP4-201ENST00000424401 1745 ntBASIC4.49□□□□□ -1.69
CLDN3O15551 Z82217.1-201ENST00000625157 8149 ntBASIC4.49□□□□□ -1.69
CLDN3O15551 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 AC018529.3-201ENST00000624212 2254 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN3O15551 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 AC026951.1-201ENST00000559530 2459 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 SPRR2C-201ENST00000290702 219 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CLDN3O15551 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLDN3O15551 SNORA60-201ENST00000362396 134 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN3O15551 AL160275.2-201ENST00000412010 394 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 OR8G2P-201ENST00000412796 908 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 GTF2IP2-201ENST00000424290 697 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 AL356276.2-201ENST00000435919 558 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 RPL29P14-201ENST00000495837 428 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 RN7SKP21-201ENST00000516503 220 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 VTA1P2-201ENST00000520205 911 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN3O15551 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.48□□□□□ -1.69
CLDN3O15551 RPL23AP87-202ENST00000573039 466 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN3O15551 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN3O15551 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.48□□□□□ -1.69
CLDN3O15551 CR589904.2-201ENST00000612533 440 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 MIR7973-1-201ENST00000614683 76 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 AC090246.1-201ENST00000616499 426 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 AC068831.8-201ENST00000620171 435 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 AP006248.2-201ENST00000623309 592 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.48□□□□□ -1.69
CLDN3O15551 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN3O15551 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN3O15551 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLDN3O15551 AL118496.1-201ENST00000440201 1812 ntBASIC4.48□□□□□ -1.69
CLDN3O15551 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLDN3O15551 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN3O15551 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CLDN3O15551 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 RHOT1P2-201ENST00000366423 333 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 MIR93-201ENST00000385024 80 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 FABP12P1-201ENST00000401911 322 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 AP000357.1-201ENST00000409926 1165 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 HSPE1P12-201ENST00000412576 301 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 TPT1P2-201ENST00000413105 503 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 LINC01881-201ENST00000416103 412 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 RPS24P8-201ENST00000431490 402 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 RPS4XP4-201ENST00000443195 763 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 HSFY6P-201ENST00000445573 403 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN3O15551 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN3O15551 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN3O15551 HMGB3P21-201ENST00000452483 547 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 RPL5P32-201ENST00000454085 879 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 OR9N1P-202ENST00000494289 481 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN3O15551 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN3O15551 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN3O15551 AC012417.1-201ENST00000582307 1039 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 MIR5684-201ENST00000585074 65 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 AC242628.1-201ENST00000606810 391 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN3O15551 AC123768.4-201ENST00000616244 701 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 RNA5SP196-201ENST00000625967 102 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 AC009501.3-201ENST00000605001 1352 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN3O15551 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN3O15551 RLIMP1-201ENST00000339626 1680 ntBASIC4.47□□□□□ -1.69
CLDN3O15551 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN3O15551 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLDN3O15551 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.46□□□□□ -1.69
CLDN3O15551 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.46□□□□□ -1.69
CLDN3O15551 AL592437.2-201ENST00000421655 2434 ntBASIC4.46□□□□□ -1.69
CLDN3O15551 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CLDN3O15551 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CLDN3O15551 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms