Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 MTCYBP19-201ENST00000517463 1124 ntBASIC4.38□□□□□ -1.71
MSH4O15457 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.38□□□□□ -1.71
MSH4O15457 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.38□□□□□ -1.71
MSH4O15457 OR4A12P-201ENST00000530847 918 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.38□□□□□ -1.71
MSH4O15457 SULT1C2P2-201ENST00000562517 294 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.38□□□□□ -1.71
MSH4O15457 AC096553.1-201ENST00000605169 829 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AL008729.2-201ENST00000606393 473 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 AC128687.2-201ENST00000609657 566 ntBASIC4.38□□□□□ -1.71
MSH4O15457 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.38□□□□□ -1.71
MSH4O15457 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 AF001550.2-201ENST00000636643 217 ntBASIC4.38□□□□□ -1.71
MSH4O15457 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 AC107027.3-201ENST00000565095 3473 ntBASIC4.38□□□□□ -1.71
MSH4O15457 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
MSH4O15457 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
MSH4O15457 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH4O15457 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.37□□□□□ -1.71
MSH4O15457 MIR93-201ENST00000385024 80 ntBASIC4.37□□□□□ -1.71
MSH4O15457 MIR134-201ENST00000385258 73 ntBASIC4.37□□□□□ -1.71
MSH4O15457 AL445189.1-201ENST00000405722 338 ntBASIC4.37□□□□□ -1.71
MSH4O15457 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.37□□□□□ -1.71
MSH4O15457 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.37□□□□□ -1.71
MSH4O15457 BTF3P9-201ENST00000418784 283 ntBASIC4.37□□□□□ -1.71
MSH4O15457 OR6K4P-201ENST00000423179 955 ntBASIC4.37□□□□□ -1.71
MSH4O15457 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.37□□□□□ -1.71
MSH4O15457 RN7SL132P-201ENST00000478131 296 ntBASIC4.37□□□□□ -1.71
MSH4O15457 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 AL139099.1-201ENST00000497398 403 ntBASIC4.37□□□□□ -1.71
MSH4O15457 AC146944.2-203ENST00000502493 354 ntBASIC4.37□□□□□ -1.71
MSH4O15457 AC021146.7-201ENST00000509604 775 ntBASIC4.37□□□□□ -1.71
MSH4O15457 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 FABP5P6-201ENST00000510588 409 ntBASIC4.37□□□□□ -1.71
MSH4O15457 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 AC139495.1-202ENST00000513164 354 ntBASIC4.37□□□□□ -1.71
MSH4O15457 AC034244.2-201ENST00000514668 858 ntBASIC4.37□□□□□ -1.71
MSH4O15457 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 RNA5SP154-201ENST00000516193 111 ntBASIC4.37□□□□□ -1.71
MSH4O15457 snoU109.6-201ENST00000516831 118 ntBASIC4.37□□□□□ -1.71
MSH4O15457 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH4O15457 NPM1P35-201ENST00000533043 868 ntBASIC4.37□□□□□ -1.71
MSH4O15457 CYCSP30-201ENST00000546447 172 ntBASIC4.37□□□□□ -1.71
MSH4O15457 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH4O15457 AC107982.3-201ENST00000584957 985 ntBASIC4.37□□□□□ -1.71
MSH4O15457 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
MSH4O15457 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.37□□□□□ -1.71
MSH4O15457 AL137072.1-201ENST00000603444 466 ntBASIC4.37□□□□□ -1.71
MSH4O15457 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH4O15457 AC090912.3-201ENST00000609775 533 ntBASIC4.37□□□□□ -1.71
MSH4O15457 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
MSH4O15457 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH4O15457 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
MSH4O15457 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH4O15457 RN7SKP224-201ENST00000364140 325 ntBASIC4.36□□□□□ -1.71
MSH4O15457 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MSH4O15457 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH4O15457 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH4O15457 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH4O15457 HMGB3P5-201ENST00000428894 612 ntBASIC4.36□□□□□ -1.71
MSH4O15457 CASP3P1-201ENST00000446037 609 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AL359073.1-201ENST00000448036 403 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AP002345.1-201ENST00000456493 928 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AC091959.2-201ENST00000477363 321 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH4O15457 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH4O15457 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MSH4O15457 AC006130.2-201ENST00000586202 326 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AC090953.1-201ENST00000604305 1092 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AL451086.1-201ENST00000605596 223 ntBASIC4.36□□□□□ -1.71
MSH4O15457 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH4O15457 AC026368.1-201ENST00000614934 690 ntBASIC4.36□□□□□ -1.71
MSH4O15457 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH4O15457 AL161637.1-201ENST00000622380 412 ntBASIC4.36□□□□□ -1.71
MSH4O15457 RPL23AP61-201ENST00000623642 466 ntBASIC4.36□□□□□ -1.71
MSH4O15457 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 852.2 ms