Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC005294.1-201ENST00000355509 281 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 RNU1-134P-201ENST00000362935 165 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.176-201ENST00000363815 109 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 RNA5SP242-201ENST00000364171 118 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 RNU6-707P-201ENST00000364647 95 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.311-201ENST00000365068 96 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 SET-203ENST00000372688 801 ntTSL 2 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 SNORD116-29-201ENST00000384516 83 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 MIR433-201ENST00000384837 93 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.598-201ENST00000410480 95 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 RPL6P29-201ENST00000414863 865 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 BX295541.1-201ENST00000417774 250 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 OR52Y1P-201ENST00000452418 828 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 MTND4P17-201ENST00000470444 350 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 KCTD9P5-201ENST00000504141 1170 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC025674.1-201ENST00000507074 324 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC010343.2-201ENST00000510162 224 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.718-201ENST00000517110 102 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC024224.1-201ENST00000538284 609 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 SNRPGP18-201ENST00000553000 214 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 CYP2C60P-201ENST00000566088 139 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC012507.3-201ENST00000603556 477 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AL391646.1-201ENST00000603860 190 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 TAS2R6P-201ENST00000605022 826 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 MIR6793-201ENST00000612376 63 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC108479.2-201ENST00000617314 601 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 AL121768.1-201ENST00000613917 2544 ntBASIC7.85□□□□□ -1.15
PDZRN3Q9UPQ7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 IMMTP1-201ENST00000435590 2219 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 OR13C1P-202ENST00000641378 2919 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 RN7SKP44-201ENST00000363602 316 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.197-201ENST00000364004 102 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 U3.23-201ENST00000391132 200 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 U3.25-201ENST00000391209 220 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AL049697.2-201ENST00000403708 294 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 NPM1P38-201ENST00000403835 865 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 RPS3AP2-201ENST00000407190 754 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 RN7SKP286-201ENST00000410894 299 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 HMGB3P2-201ENST00000411913 584 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 MTND3P8-201ENST00000412909 339 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC245096.1-201ENST00000413104 546 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC109780.2-201ENST00000413467 845 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 RAC1P6-201ENST00000423911 575 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 FCF1P1-201ENST00000432690 571 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 MTCO3P20-201ENST00000454926 688 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC090013.1-201ENST00000485147 480 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC008945.1-201ENST00000505144 499 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC105417.1-201ENST00000514691 285 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC009812.2-201ENST00000517657 457 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC107953.1-201ENST00000522216 297 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AL390334.1-201ENST00000556395 450 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC007494.1-201ENST00000562293 760 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 AC092121.1-201ENST00000569452 202 ntBASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.84□□□□□ -1.15
PDZRN3Q9UPQ7 RNA5SP440-201ENST00000612665 119 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms