Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL353752.1-201ENST00000454946 260 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 RNU7-136P-201ENST00000458819 69 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC063943.2-201ENST00000495697 534 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 MRPS5P3-201ENST00000515577 166 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 SCARNA5-201ENST00000516201 276 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AL049779.3-201ENST00000557141 606 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC015818.6-201ENST00000584274 634 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC114477.1-201ENST00000605097 605 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC015819.1-201ENST00000613588 663 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 CR381572.1-201ENST00000625098 102 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 SNORA38B-201ENST00000363524 131 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.214-201ENST00000364201 112 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 RNU6-1117P-201ENST00000384525 104 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 MIR541-201ENST00000401360 84 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 MRPS21P5-201ENST00000417885 231 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AL139109.1-201ENST00000455491 297 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 TRBV8-2-201ENST00000475637 270 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 RN7SL502P-201ENST00000481857 290 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC015524.1-201ENST00000491585 472 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC093870.1-201ENST00000506837 213 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 BTG4P1-201ENST00000510421 183 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 MIR6823-201ENST00000622118 61 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC130448.2-201ENST00000624082 374 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 AC092821.3-202ENST00000641304 2767 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 MAPK10-357ENST00000641831 2858 ntBASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM35Q9UPQ4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AL139276.1-201ENST00000311910 1001 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 RNY1-201ENST00000364228 113 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 SNORD50.2-201ENST00000365465 70 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 SNORD14.1-201ENST00000365609 90 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 MIR551B-201ENST00000384984 96 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 MIR640-201ENST00000385086 96 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 CYCSP24-201ENST00000445119 316 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 RNU7-180P-201ENST00000459240 63 ntBASIC8.67□□□□□ -1.02
TRIM35Q9UPQ4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms