Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 HIGD1AP18-201ENST00000520730 278 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 PSMB7P1-201ENST00000556349 514 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 MIR4512-201ENST00000583257 77 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 SS18L2P2-201ENST00000583960 235 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC139769.3-201ENST00000618383 175 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RNU1-18P-201ENST00000363062 164 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RNU6-666P-201ENST00000363499 107 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AL138878.1-201ENST00000405131 347 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RN7SKP177-201ENST00000410567 355 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 HSPE1P12-201ENST00000412576 301 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AL121578.1-201ENST00000428051 892 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 CNOT7P1-201ENST00000429006 852 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RPS17P13-201ENST00000448974 407 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RPL5P32-201ENST00000454085 879 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RPL38P1-201ENST00000460914 211 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 HMGN1P8-201ENST00000463578 288 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC108475.1-201ENST00000507880 950 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC034244.2-201ENST00000514668 858 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC091515.1-201ENST00000548110 679 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AGGF1P8-201ENST00000562979 1000 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 MIR4458-201ENST00000578872 75 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 VN1R84P-201ENST00000593697 235 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC010857.1-201ENST00000606398 594 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC015813.6-201ENST00000624409 5808 ntBASIC3.75□□□□□ -1.81
VAPAQ9P0L0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
VAPAQ9P0L0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 LINC00561-201ENST00000565815 2738 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 OR4K17-201ENST00000315543 1032 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RNA5SP399-201ENST00000364003 117 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RNA5SP509-201ENST00000364577 119 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RNU6-244P-201ENST00000391028 104 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RPL7AP73-201ENST00000413490 353 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RPL7P4-203ENST00000430239 730 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AL138878.2-201ENST00000440581 1241 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AL353898.1-201ENST00000444055 238 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 snoU13.1-201ENST00000459157 104 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RN7SL303P-201ENST00000469773 251 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC006511.1-201ENST00000470614 315 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC004069.2-201ENST00000505438 1114 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 MIR2114-201ENST00000516645 80 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 EIF1P6-201ENST00000600054 334 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AL390816.3-201ENST00000604527 1066 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 HMGB1P51-201ENST00000605166 638 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC005021.1-201ENST00000608730 355 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AP000843.1-201ENST00000624880 701 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC019080.5-201ENST00000624891 757 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 AC009452.1-201ENST00000640823 606 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 LARP1BP1-201ENST00000506036 1359 ntBASIC3.74□□□□□ -1.81
VAPAQ9P0L0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.74□□□□□ -1.81
VAPAQ9P0L0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms