Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC010245.2-201ENST00000606908 1167 ntBASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 AC068722.2-201ENST00000618734 544 ntBASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 AC013470.4-201ENST00000619978 986 ntBASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 AC011330.2-201ENST00000621680 635 ntBASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHB16Q9NRJ7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RN7SKP113-201ENST00000363891 295 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RN7SKP124-201ENST00000364730 341 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AL035079.1-201ENST00000405210 287 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 ZNF603P-201ENST00000405613 487 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC093655.2-201ENST00000425735 631 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 OR4F13P-201ENST00000428478 931 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RPL31P54-201ENST00000429803 370 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 Z77249.1-201ENST00000444622 1175 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AURKAPS1-201ENST00000451805 1212 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC016724.1-201ENST00000453215 421 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 FGF7P3-201ENST00000454645 303 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC026348.1-201ENST00000462549 1053 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC100832.1-201ENST00000471945 383 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RNF138P1-201ENST00000502765 546 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 PRELID3BP5-201ENST00000508612 460 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC021146.3-201ENST00000511911 260 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MTCO1P30-201ENST00000515244 580 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 SNORA48.10-201ENST00000516965 160 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 Y_RNA.717-201ENST00000517106 92 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 OR4A12P-201ENST00000530847 918 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 TRAV15-201ENST00000556680 249 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MIR4504-201ENST00000577413 92 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RNF138P2-201ENST00000603490 592 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC113194.1-201ENST00000606037 500 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC107952.2-201ENST00000606048 486 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC000068.2-201ENST00000608816 460 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC097478.2-201ENST00000610572 514 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 SEPT7P7-201ENST00000420492 1301 ntBASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB16Q9NRJ7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC092747.4-201ENST00000620519 1861 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL136133.1-201ENST00000413694 376 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 RPS15AP40-201ENST00000419621 391 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 MTCO3P1-205ENST00000422088 832 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL121776.1-201ENST00000429337 372 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 SPRYD7P1-201ENST00000443861 570 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 MYO5BP2-201ENST00000449815 1277 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AL035090.1-201ENST00000454835 332 ntBASIC4.43□□□□□ -1.7
PCDHB16Q9NRJ7 AC093166.2-201ENST00000455969 1017 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms