Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
NXF3Q9H4D5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 PHKBP1-201ENST00000450951 1951 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC074029.4-201ENST00000624796 1859 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 OR4A15-201ENST00000314706 1035 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 RNU6-984P-201ENST00000363236 109 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 SNORA62.3-201ENST00000365110 153 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AL136131.1-201ENST00000406079 803 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 RNU6ATAC-201ENST00000408749 126 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 OR2X1P-201ENST00000421144 687 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 IPMKP1-201ENST00000425988 855 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC007389.2-201ENST00000434630 306 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 CASP3P1-201ENST00000446037 609 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 HAUS1P1-201ENST00000505275 832 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC025554.1-201ENST00000505641 188 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC006499.6-201ENST00000511169 607 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 NDUFB4P12-201ENST00000513465 390 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC093853.1-201ENST00000515689 483 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 FAM106CP-201ENST00000582212 507 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 AC112200.1-201ENST00000625015 234 ntBASIC4.27□□□□□ -1.73
NXF3Q9H4D5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NXF3Q9H4D5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 OR10J6P-201ENST00000289731 930 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 RNU1-85P-201ENST00000364127 164 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 MIR1251-201ENST00000408552 70 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 RN7SKP156-201ENST00000410308 342 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 GSTM3P2-201ENST00000412746 530 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 RPL7AP73-201ENST00000413490 353 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC093084.1-201ENST00000424233 687 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 BMS1P19-201ENST00000433925 393 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC083863.1-201ENST00000438811 231 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AP002812.1-201ENST00000495378 474 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC017037.1-201ENST00000508460 471 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 RN7SKP141-201ENST00000516167 338 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 IGKV2-38-201ENST00000517443 247 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 MIR92B-201ENST00000607575 96 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AL121772.2-201ENST00000614331 297 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC245389.2-201ENST00000616023 576 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AL158196.1-201ENST00000616786 434 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC009237.17-201ENST00000618111 748 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AC242843.1-201ENST00000618702 573 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AL773545.4-201ENST00000637262 310 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 AL513478.4-201ENST00000641636 310 ntBASIC4.26□□□□□ -1.73
NXF3Q9H4D5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NXF3Q9H4D5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 RNU4-7P-201ENST00000364758 141 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL590704.1-201ENST00000402856 794 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL121834.1-202ENST00000404494 277 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL389915.1-201ENST00000422463 466 ntBASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.25□□□□□ -1.73
NXF3Q9H4D5 AC018644.1-201ENST00000429934 551 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms