Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC4Q92889 RNU6-500P-201ENST00000362349 107 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 U3.3-201ENST00000362986 216 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 SNORA51.1-201ENST00000363243 140 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC4Q92889 RNU1-74P-201ENST00000384108 171 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 MIR16-1-201ENST00000385271 89 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 MT-TH-201ENST00000387441 69 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 RNA5SP339-201ENST00000390987 122 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 U3.25-201ENST00000391209 220 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 SNORA26.8-201ENST00000391306 124 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 OR8V1P-201ENST00000395193 873 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AC013442.1-201ENST00000397347 228 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC4Q92889 AF274854.1-201ENST00000413236 615 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.79□□□□□ -1.48
ERCC4Q92889 MRPS36P1-201ENST00000421291 307 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC104333.2-201ENST00000422630 192 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC022022.1-201ENST00000430304 178 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 FAM96AP1-201ENST00000430879 482 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 CACYBPP1-201ENST00000438592 684 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AL133244.1-201ENST00000456007 258 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 RPL7P1-201ENST00000468161 747 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 RPL7P9-201ENST00000468715 747 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AC104687.1-201ENST00000485829 412 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AC111193.1-201ENST00000504097 155 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 MTATP6P22-201ENST00000507369 598 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.79□□□□□ -1.48
ERCC4Q92889 BNIP3P1-201ENST00000547295 580 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.79□□□□□ -1.48
ERCC4Q92889 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC103881.1-201ENST00000603476 538 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ERCC4Q92889 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC4Q92889 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC4Q92889 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ERCC4Q92889 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC4Q92889 MTCO1P11-201ENST00000429111 1528 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC4Q92889 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC4Q92889 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC4Q92889 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 HSPA8P18-201ENST00000439846 1928 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
ERCC4Q92889 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ERCC4Q92889 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC4Q92889 RNU6-619P-201ENST00000365146 108 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ERCC4Q92889 TAF9BP1-201ENST00000396646 746 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC004022.2-201ENST00000413824 193 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC4Q92889 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC4Q92889 RPL34P6-201ENST00000432390 345 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 BX248409.1-201ENST00000455497 255 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 VPS26AP1-201ENST00000483197 979 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AL024509.2-201ENST00000493462 493 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 DSTNP2-201ENST00000504533 515 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC097173.1-201ENST00000505862 819 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 LTV1P1-201ENST00000510683 1237 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 RPL7L1P4-201ENST00000513004 707 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 Y_RNA.695-201ENST00000516715 107 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 RNU6-678P-201ENST00000516832 109 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC087808.1-201ENST00000520501 361 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC018442.3-201ENST00000523025 183 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC4Q92889 OR4K7P-201ENST00000580232 945 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms