Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU1-20P-201ENST00000363314 162 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RNA5SP372-201ENST00000390836 115 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RNA5SP397-201ENST00000391323 118 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 HDGFP1-201ENST00000405943 252 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RNA5SP146-201ENST00000410743 123 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RPL21P108-201ENST00000413857 481 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 CEACAMP8-201ENST00000413902 580 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC004448.2-201ENST00000422360 586 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RPS27AP7-201ENST00000422792 455 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC092447.2-201ENST00000435487 669 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 H2AFZP5-201ENST00000446960 382 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RPL23AP15-201ENST00000450202 459 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 MTND2P28-201ENST00000457540 1044 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 ATP5G1P3-201ENST00000463301 410 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC090142.1-201ENST00000465776 462 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RN7SL385P-201ENST00000468873 276 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC104689.1-201ENST00000473356 768 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 RPL36AP41-201ENST00000493820 306 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC025164.1-201ENST00000496249 478 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 OR5H4P-201ENST00000510851 923 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 OR7A19P-201ENST00000608051 733 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AL109620.1-201ENST00000618738 1197 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AP003476.1-201ENST00000623984 516 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 LINC01808-202ENST00000641680 1116 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AC074029.4-201ENST00000624796 1859 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL136164.3-201ENST00000624429 3978 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 RNU1-94P-201ENST00000362627 173 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 SNORA71.2-201ENST00000364941 134 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 PRRC2CP1-201ENST00000404428 159 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 RNU6-272P-201ENST00000411028 104 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 RPL18P10-201ENST00000425606 538 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 IPMKP1-201ENST00000425988 855 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC091390.1-201ENST00000433904 331 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 HMGB1P45-201ENST00000435986 653 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 RPL21P133-201ENST00000443666 476 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 MTND1P33-201ENST00000446251 917 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC008280.2-201ENST00000455473 307 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 RPL21P18-201ENST00000469899 480 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC005351.1-201ENST00000511152 786 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 PRELID3BP4-201ENST00000515476 571 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 RNA5SP446-201ENST00000515955 82 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC124293.1-201ENST00000530034 493 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL161713.1-201ENST00000555538 145 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC010735.1-201ENST00000567305 1026 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC069061.3-201ENST00000582254 823 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 MIR4715-201ENST00000584117 79 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 DNAJC19P3-201ENST00000594491 331 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC091979.2-201ENST00000607514 214 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AP000843.1-201ENST00000624880 701 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL109659.3-201ENST00000624985 950 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL138960.2-201ENST00000625145 535 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC106858.1-201ENST00000637497 429 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AC091046.3-201ENST00000631455 1574 ntBASIC4.72□□□□□ -1.65
PRPF39Q86UA1 AL355852.1-201ENST00000454081 1771 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms