Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AL121657.1-201ENST00000327215 531 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 IL6STP1-201ENST00000346911 1020 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 Y_RNA.11-201ENST00000362375 109 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 RNU6-353P-201ENST00000364266 108 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
USP39Q53GS9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP39Q53GS9 EI24P3-201ENST00000399046 1062 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 HSPA8P15-201ENST00000401676 786 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.42□□□□□ -1.54
USP39Q53GS9 RPL21P43-201ENST00000425440 472 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 RPL12P18-201ENST00000437175 325 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 TRIM60P18-201ENST00000441518 828 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.42□□□□□ -1.54
USP39Q53GS9 ST13P20-201ENST00000447996 1065 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 TPT1P14-201ENST00000448018 505 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 FDX1P2-201ENST00000450769 375 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC009127.1-201ENST00000467090 155 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP39Q53GS9 GAPDHP36-201ENST00000480688 918 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
USP39Q53GS9 HMGB3P13-201ENST00000511263 607 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 HNRNPKP5-201ENST00000515300 253 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC025881.1-201ENST00000518851 512 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.42□□□□□ -1.54
USP39Q53GS9 OR6C7P-201ENST00000547875 934 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC127381.1-201ENST00000555979 939 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 BGLT3-201ENST00000564523 994 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.42□□□□□ -1.54
USP39Q53GS9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.42□□□□□ -1.54
USP39Q53GS9 AP005262.1-201ENST00000582646 997 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 AC015922.4-201ENST00000612568 690 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC090517.2-201ENST00000614966 680 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AL607023.1-201ENST00000620045 248 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AL356321.1-201ENST00000621360 228 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.42□□□□□ -1.54
USP39Q53GS9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.42□□□□□ -1.54
USP39Q53GS9 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USP39Q53GS9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.42□□□□□ -1.54
USP39Q53GS9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
USP39Q53GS9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 ADAM24P-201ENST00000398655 2101 ntBASIC5.42□□□□□ -1.54
USP39Q53GS9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.42□□□□□ -1.54
USP39Q53GS9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP39Q53GS9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.42□□□□□ -1.54
USP39Q53GS9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 RNU6-500P-201ENST00000362349 107 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 RNU6-931P-201ENST00000363850 107 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 Y_RNA.408-201ENST00000383987 102 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC104297.1-201ENST00000393779 870 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AL079342.2-201ENST00000403367 482 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 BTF3P7-201ENST00000407097 488 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 TCEA1P4-201ENST00000415066 844 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AL139421.1-201ENST00000423010 169 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.41□□□□□ -1.54
USP39Q53GS9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.41□□□□□ -1.54
USP39Q53GS9 CDY14P-201ENST00000431260 1014 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP39Q53GS9 CEACAMP9-201ENST00000442990 513 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AL592437.1-201ENST00000443781 492 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 EEF1E1P1-201ENST00000446998 430 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 CDY23P-201ENST00000451661 1014 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 RPL21P134-201ENST00000453468 483 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 RNU7-140P-201ENST00000459546 60 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC006463.2-201ENST00000473326 348 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC037198.2-201ENST00000478845 733 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC004924.1-201ENST00000480160 781 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 CEACAMP10-202ENST00000495431 496 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC074344.1-201ENST00000512823 224 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC004980.4-201ENST00000513375 203 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AP003392.2-201ENST00000527269 208 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC122688.1-201ENST00000541494 223 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms