Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC015802.5-201ENST00000607478 399 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 uc_338.32-201ENST00000615087 172 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AC107308.1-201ENST00000615897 301 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RFX4Q33E94 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.79□□□□□ -1.8
RFX4Q33E94 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RFX4Q33E94 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFX4Q33E94 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RFX4Q33E94 EIF2AP4-201ENST00000424793 1781 ntBASIC3.79□□□□□ -1.8
RFX4Q33E94 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
RFX4Q33E94 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC025031.4-201ENST00000621248 3271 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX4Q33E94 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFX4Q33E94 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFX4Q33E94 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX4Q33E94 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX4Q33E94 RNU1-14P-201ENST00000362759 152 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFX4Q33E94 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFX4Q33E94 MTND3P20-201ENST00000407663 186 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 RN7SKP235-201ENST00000410662 305 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC119751.6-201ENST00000416712 186 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 P2RY10P2-201ENST00000416730 913 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AL606490.7-201ENST00000433136 191 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AL353898.1-201ENST00000444055 238 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX4Q33E94 DNAJC19P1-201ENST00000455312 319 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 TPRKBP1-201ENST00000456243 481 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RFX4Q33E94 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX4Q33E94 RPS27AP16-201ENST00000492222 470 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 RN7SL810P-201ENST00000493031 276 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC005912.1-201ENST00000495392 255 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC021087.2-201ENST00000504656 1203 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC004069.2-201ENST00000505438 1114 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC026726.1-201ENST00000512859 601 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX4Q33E94 RNU7-143P-201ENST00000516781 65 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 IGLVIV-65-201ENST00000517313 360 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC022968.1-201ENST00000567372 442 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC012417.1-201ENST00000582307 1039 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC007448.1-201ENST00000582714 234 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.78□□□□□ -1.8
RFX4Q33E94 RPL12P25-202ENST00000598100 674 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 ABI1P1-201ENST00000603375 1120 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 AC093765.1-201ENST00000603758 881 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AL445363.3-201ENST00000623080 671 ntBASIC3.78□□□□□ -1.8
RFX4Q33E94 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.78□□□□□ -1.8
RFX4Q33E94 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RFX4Q33E94 AC007529.1-201ENST00000418574 2178 ntBASIC3.78□□□□□ -1.81
RFX4Q33E94 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.77□□□□□ -1.81
RFX4Q33E94 MTND4P10-201ENST00000446199 1363 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX4Q33E94 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.77□□□□□ -1.81
RFX4Q33E94 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RFX4Q33E94 RNA5SP505-201ENST00000364748 108 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 SNORA27.3-201ENST00000364937 134 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFX4Q33E94 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RFX4Q33E94 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RFX4Q33E94 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 RNA5SP36-201ENST00000410197 133 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 AC048351.1-201ENST00000420064 602 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 MFSD13B-201ENST00000420133 1290 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.77□□□□□ -1.81
RFX4Q33E94 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AL627224.1-201ENST00000448334 444 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 RPL7P32-201ENST00000457119 744 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 MTND2P28-201ENST00000457540 1044 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AC092045.1-201ENST00000495716 1231 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AC111000.3-201ENST00000508057 576 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 RN7SKP92-201ENST00000517266 244 ntBASIC3.77□□□□□ -1.81
RFX4Q33E94 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.77□□□□□ -1.81
RFX4Q33E94 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms