Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HSPG2P98160 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HSPG2P98160 RN7SKP97-201ENST00000410966 333 ntBASIC2.27□□□□□ -2.05
HSPG2P98160 VTI1BP4-201ENST00000427516 527 ntBASIC2.27□□□□□ -2.05
HSPG2P98160 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.27□□□□□ -2.05
HSPG2P98160 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.27□□□□□ -2.05
HSPG2P98160 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
HSPG2P98160 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
HSPG2P98160 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HSPG2P98160 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.27□□□□□ -2.05
HSPG2P98160 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HSPG2P98160 AC090337.1-201ENST00000579651 2074 ntBASIC2.27□□□□□ -2.05
HSPG2P98160 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 MIR195-201ENST00000385194 87 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 SNORA48.8-201ENST00000391324 134 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 RPL31P61-201ENST00000496160 376 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 HIGD1AP3-201ENST00000515857 278 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.26□□□□□ -2.05
HSPG2P98160 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.26□□□□□ -2.05
HSPG2P98160 AC118273.1-201ENST00000525324 3006 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HSPG2P98160 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 AL024507.1-201ENST00000412741 274 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 SNORA70.17-201ENST00000516449 133 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 IGLV3-26-201ENST00000520756 302 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC016839.1-201ENST00000578162 867 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.26□□□□□ -2.05
HSPG2P98160 AC124312.4-201ENST00000605533 310 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 AL080315.1-201ENST00000406055 466 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.26□□□□□ -2.05
HSPG2P98160 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 NANOGNBP1-201ENST00000448444 480 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.26□□□□□ -2.05
HSPG2P98160 IGKV1OR2-1-201ENST00000514060 354 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.26□□□□□ -2.05
HSPG2P98160 AC106734.1-201ENST00000568646 663 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 Xist_exon4.1-201ENST00000615964 126 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC234782.5-201ENST00000617723 324 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AL157762.1-201ENST00000619612 415 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 HSPD1P14-201ENST00000432666 1618 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 USP8P1-201ENST00000494673 3183 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HSPG2P98160 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.26□□□□□ -2.05
HSPG2P98160 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.26□□□□□ -2.05
HSPG2P98160 STMN1P2-201ENST00000508435 439 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.26□□□□□ -2.05
HSPG2P98160 AC009852.2-201ENST00000567898 485 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 BMS1P21-201ENST00000634565 365 ntBASIC2.26□□□□□ -2.05
HSPG2P98160 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
HSPG2P98160 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HSPG2P98160 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 GNG5P1-201ENST00000255500 204 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AL358178.1-201ENST00000407698 397 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 RNA5SP247-201ENST00000411181 105 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 Z99755.1-201ENST00000414048 380 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC2.25□□□□□ -2.05
HSPG2P98160 AC108938.1-201ENST00000451204 136 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 SLC31A1P1-201ENST00000451221 567 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AP002884.2-201ENST00000471647 395 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AC008802.1-201ENST00000519121 791 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AC112503.1-201ENST00000608436 391 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms