Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TPM4P67936 MIR383-201ENST00000362257 73 ntBASIC4.32□□□□□ -1.72
TPM4P67936 RNA5SP366-201ENST00000365454 123 ntBASIC4.32□□□□□ -1.72
TPM4P67936 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TPM4P67936 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 RNU11-4P-201ENST00000391149 133 ntBASIC4.32□□□□□ -1.72
TPM4P67936 HMGB1P32-201ENST00000425971 565 ntBASIC4.32□□□□□ -1.72
TPM4P67936 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 CNOT7P1-201ENST00000429006 852 ntBASIC4.32□□□□□ -1.72
TPM4P67936 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 CACYBPP1-201ENST00000438592 684 ntBASIC4.32□□□□□ -1.72
TPM4P67936 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 RN7SL303P-201ENST00000469773 251 ntBASIC4.32□□□□□ -1.72
TPM4P67936 RPL7L1P8-201ENST00000469911 741 ntBASIC4.32□□□□□ -1.72
TPM4P67936 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 AC108471.1-201ENST00000513977 287 ntBASIC4.32□□□□□ -1.72
TPM4P67936 AC008802.1-201ENST00000519121 791 ntBASIC4.32□□□□□ -1.72
TPM4P67936 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM4P67936 AL390816.3-201ENST00000604527 1066 ntBASIC4.32□□□□□ -1.72
TPM4P67936 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM4P67936 AP001784.1-201ENST00000624107 428 ntBASIC4.32□□□□□ -1.72
TPM4P67936 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TPM4P67936 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM4P67936 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.31□□□□□ -1.72
TPM4P67936 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM4P67936 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM4P67936 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM4P67936 RNA5SP443-201ENST00000363083 132 ntBASIC4.31□□□□□ -1.72
TPM4P67936 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.31□□□□□ -1.72
TPM4P67936 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 MIR92A2-201ENST00000385299 75 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AL034374.1-201ENST00000406329 351 ntBASIC4.31□□□□□ -1.72
TPM4P67936 RNA5SP239-201ENST00000410218 129 ntBASIC4.31□□□□□ -1.72
TPM4P67936 SMC4P1-201ENST00000414479 527 ntBASIC4.31□□□□□ -1.72
TPM4P67936 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM4P67936 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM4P67936 RPL23AP38-201ENST00000423801 469 ntBASIC4.31□□□□□ -1.72
TPM4P67936 CBX1P1-201ENST00000440184 427 ntBASIC4.31□□□□□ -1.72
TPM4P67936 CALM1P2-201ENST00000452941 448 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AC004801.2-202ENST00000463559 283 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AL132838.2-201ENST00000492041 314 ntBASIC4.31□□□□□ -1.72
TPM4P67936 NDUFA5P12-201ENST00000503796 343 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AC093720.1-201ENST00000505681 714 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM4P67936 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.31□□□□□ -1.72
TPM4P67936 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM4P67936 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM4P67936 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM4P67936 ABI1P1-201ENST00000603375 1120 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AL592295.2-201ENST00000612578 206 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AC010608.2-201ENST00000624830 470 ntBASIC4.31□□□□□ -1.72
TPM4P67936 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM4P67936 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM4P67936 AC009452.1-201ENST00000640823 606 ntBASIC4.31□□□□□ -1.72
TPM4P67936 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TPM4P67936 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM4P67936 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TPM4P67936 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TPM4P67936 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TPM4P67936 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TPM4P67936 AL034403.1-201ENST00000399414 885 ntBASIC4.3□□□□□ -1.72
TPM4P67936 RN7SKP177-201ENST00000410567 355 ntBASIC4.3□□□□□ -1.72
TPM4P67936 RPL23AP26-201ENST00000412728 464 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AL590139.1-201ENST00000416267 400 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.3□□□□□ -1.72
TPM4P67936 AL772161.1-201ENST00000439130 476 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.3□□□□□ -1.72
TPM4P67936 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 AP000926.1-201ENST00000479573 241 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AC041039.1-201ENST00000485656 536 ntBASIC4.3□□□□□ -1.72
TPM4P67936 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms