Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.93□□□□□ -1.78
RPA3P35244 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.93□□□□□ -1.78
RPA3P35244 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.93□□□□□ -1.78
RPA3P35244 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.93□□□□□ -1.78
RPA3P35244 NPM1P35-201ENST00000533043 868 ntBASIC3.93□□□□□ -1.78
RPA3P35244 HMGB3P26-201ENST00000560051 582 ntBASIC3.93□□□□□ -1.78
RPA3P35244 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.93□□□□□ -1.78
RPA3P35244 AC090877.1-201ENST00000561418 344 ntBASIC3.93□□□□□ -1.78
RPA3P35244 AC018552.3-201ENST00000567416 561 ntBASIC3.93□□□□□ -1.78
RPA3P35244 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.93□□□□□ -1.78
RPA3P35244 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 MIR6810-201ENST00000622701 70 ntBASIC3.93□□□□□ -1.78
RPA3P35244 AC091905.1-201ENST00000624400 311 ntBASIC3.93□□□□□ -1.78
RPA3P35244 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPA3P35244 OR10AB1P-202ENST00000641219 1686 ntBASIC3.93□□□□□ -1.78
RPA3P35244 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.93□□□□□ -1.78
RPA3P35244 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 AC110792.3-201ENST00000595906 1614 ntBASIC3.92□□□□□ -1.78
RPA3P35244 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RPA3P35244 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 AC009313.2-201ENST00000417893 1941 ntBASIC3.92□□□□□ -1.78
RPA3P35244 RNA5SP399-201ENST00000364003 117 ntBASIC3.92□□□□□ -1.78
RPA3P35244 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.92□□□□□ -1.78
RPA3P35244 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 MT-TP-201ENST00000387461 68 ntBASIC3.92□□□□□ -1.78
RPA3P35244 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
RPA3P35244 RPL7AP73-201ENST00000413490 353 ntBASIC3.92□□□□□ -1.78
RPA3P35244 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.92□□□□□ -1.78
RPA3P35244 AL365396.1-201ENST00000430854 671 ntBASIC3.92□□□□□ -1.78
RPA3P35244 SKP1P1-201ENST00000438081 489 ntBASIC3.92□□□□□ -1.78
RPA3P35244 ELOCP10-201ENST00000440624 327 ntBASIC3.92□□□□□ -1.78
RPA3P35244 HMGB3P9-201ENST00000441799 583 ntBASIC3.92□□□□□ -1.78
RPA3P35244 RAB28P3-201ENST00000448325 597 ntBASIC3.92□□□□□ -1.78
RPA3P35244 CLIC4P1-201ENST00000453177 535 ntBASIC3.92□□□□□ -1.78
RPA3P35244 MTCO3P16-201ENST00000454456 754 ntBASIC3.92□□□□□ -1.78
RPA3P35244 MTCO3P20-201ENST00000454926 688 ntBASIC3.92□□□□□ -1.78
RPA3P35244 DNAJC19P1-201ENST00000455312 319 ntBASIC3.92□□□□□ -1.78
RPA3P35244 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.92□□□□□ -1.78
RPA3P35244 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RPA3P35244 AC022336.1-201ENST00000475510 337 ntBASIC3.92□□□□□ -1.78
RPA3P35244 TRBV12-2-201ENST00000489763 344 ntBASIC3.92□□□□□ -1.78
RPA3P35244 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.92□□□□□ -1.78
RPA3P35244 SNORD116-30-201ENST00000516468 85 ntBASIC3.92□□□□□ -1.78
RPA3P35244 MIR2116-201ENST00000517221 80 ntBASIC3.92□□□□□ -1.78
RPA3P35244 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.92□□□□□ -1.78
RPA3P35244 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.92□□□□□ -1.78
RPA3P35244 AC092851.1-201ENST00000535964 478 ntBASIC3.92□□□□□ -1.78
RPA3P35244 AC092747.2-201ENST00000545069 983 ntBASIC3.92□□□□□ -1.78
RPA3P35244 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.92□□□□□ -1.78
RPA3P35244 AC136624.4-201ENST00000573044 370 ntBASIC3.92□□□□□ -1.78
RPA3P35244 MIR4697-201ENST00000582977 78 ntBASIC3.92□□□□□ -1.78
RPA3P35244 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.92□□□□□ -1.78
RPA3P35244 ELOCP34-201ENST00000604436 327 ntBASIC3.92□□□□□ -1.78
RPA3P35244 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 AC092653.1-201ENST00000608509 531 ntBASIC3.92□□□□□ -1.78
RPA3P35244 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.92□□□□□ -1.78
RPA3P35244 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.92□□□□□ -1.78
RPA3P35244 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 AC090971.4-201ENST00000560291 1800 ntBASIC3.92□□□□□ -1.78
RPA3P35244 MFSD8-220ENST00000641243 1422 ntBASIC3.92□□□□□ -1.78
RPA3P35244 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.92□□□□□ -1.78
RPA3P35244 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPA3P35244 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RPA3P35244 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPA3P35244 MIR365B-201ENST00000362317 111 ntBASIC3.91□□□□□ -1.78
RPA3P35244 AL138878.1-201ENST00000405131 347 ntBASIC3.91□□□□□ -1.78
RPA3P35244 RNA5SP317-201ENST00000410176 116 ntBASIC3.91□□□□□ -1.78
RPA3P35244 RNA5SP311-201ENST00000411290 116 ntBASIC3.91□□□□□ -1.78
RPA3P35244 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 RPS27AP12-201ENST00000429552 465 ntBASIC3.91□□□□□ -1.78
RPA3P35244 AL353597.2-202ENST00000434901 373 ntBASIC3.91□□□□□ -1.78
RPA3P35244 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.91□□□□□ -1.78
RPA3P35244 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.91□□□□□ -1.78
RPA3P35244 EIF4A1P11-201ENST00000451239 222 ntBASIC3.91□□□□□ -1.78
RPA3P35244 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.91□□□□□ -1.78
RPA3P35244 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 RN7SL860P-201ENST00000473738 223 ntBASIC3.91□□□□□ -1.78
RPA3P35244 LARP7P4-201ENST00000481075 878 ntBASIC3.91□□□□□ -1.78
RPA3P35244 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.91□□□□□ -1.78
RPA3P35244 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.91□□□□□ -1.78
RPA3P35244 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.91□□□□□ -1.78
RPA3P35244 RNA5SP315-201ENST00000516340 116 ntBASIC3.91□□□□□ -1.78
RPA3P35244 RNA5SP312-201ENST00000517068 116 ntBASIC3.91□□□□□ -1.78
RPA3P35244 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
RPA3P35244 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.91□□□□□ -1.78
RPA3P35244 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.91□□□□□ -1.78
RPA3P35244 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms