Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.08□□□□□ -1.6
CD40P25942 MIR6729-201ENST00000618194 65 ntBASIC5.08□□□□□ -1.6
CD40P25942 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 CR381653.2-201ENST00000624041 768 ntBASIC5.08□□□□□ -1.6
CD40P25942 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CD40P25942 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 OR13C1P-202ENST00000641378 2919 ntBASIC5.08□□□□□ -1.6
CD40P25942 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.08□□□□□ -1.6
CD40P25942 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CD40P25942 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CD40P25942 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.08□□□□□ -1.6
CD40P25942 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 AC130650.2-201ENST00000618736 2403 ntBASIC5.07□□□□□ -1.6
CD40P25942 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 MIR323A-201ENST00000362199 86 ntBASIC5.07□□□□□ -1.6
CD40P25942 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CD40P25942 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 RPL17P50-201ENST00000396131 546 ntBASIC5.07□□□□□ -1.6
CD40P25942 RN7SKP286-201ENST00000410894 299 ntBASIC5.07□□□□□ -1.6
CD40P25942 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 RPL34P3-201ENST00000421454 338 ntBASIC5.07□□□□□ -1.6
CD40P25942 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.07□□□□□ -1.6
CD40P25942 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CD40P25942 RPS12P17-201ENST00000438591 377 ntBASIC5.07□□□□□ -1.6
CD40P25942 MTND6P13-201ENST00000443510 523 ntBASIC5.07□□□□□ -1.6
CD40P25942 AP000542.1-201ENST00000448473 371 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 AC005297.2-201ENST00000450430 606 ntBASIC5.07□□□□□ -1.6
CD40P25942 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 PPIAP21-201ENST00000464473 501 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 RN7SL174P-201ENST00000475578 289 ntBASIC5.07□□□□□ -1.6
CD40P25942 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 AC106872.4-201ENST00000510050 523 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC110792.2-201ENST00000510278 224 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC091133.4-201ENST00000511142 308 ntBASIC5.07□□□□□ -1.6
CD40P25942 RN7SKP288-201ENST00000516227 268 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.07□□□□□ -1.6
CD40P25942 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 AL121594.2-201ENST00000541658 472 ntBASIC5.07□□□□□ -1.6
CD40P25942 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.07□□□□□ -1.6
CD40P25942 MIR4260-201ENST00000583107 67 ntBASIC5.07□□□□□ -1.6
CD40P25942 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 AP000860.1-201ENST00000605250 559 ntBASIC5.07□□□□□ -1.6
CD40P25942 AL445264.1-201ENST00000621719 171 ntBASIC5.07□□□□□ -1.6
CD40P25942 AL157786.1-207ENST00000627771 695 ntBASIC5.07□□□□□ -1.6
CD40P25942 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.07□□□□□ -1.6
CD40P25942 CYP3A51P-201ENST00000633513 256 ntBASIC5.07□□□□□ -1.6
CD40P25942 AC099654.13-201ENST00000639774 207 ntBASIC5.07□□□□□ -1.6
CD40P25942 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.07□□□□□ -1.6
CD40P25942 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 ELF2P3-201ENST00000445099 1506 ntBASIC5.07□□□□□ -1.6
CD40P25942 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.07□□□□□ -1.6
CD40P25942 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CD40P25942 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.07□□□□□ -1.6
CD40P25942 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CD40P25942 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.06□□□□□ -1.6
CD40P25942 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD40P25942 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD40P25942 ELL2P4-201ENST00000446870 1376 ntBASIC5.06□□□□□ -1.6
CD40P25942 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CD40P25942 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms