Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP2AP11388 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TOP2AP11388 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP2AP11388 AC069285.2-201ENST00000440210 275 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 RPL21P13-201ENST00000488305 481 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP2AP11388 AC010342.1-201ENST00000514047 877 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP2AP11388 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TOP2AP11388 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP2AP11388 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.38□□□□□ -1.39
TOP2AP11388 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP2AP11388 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.38□□□□□ -1.39
TOP2AP11388 MIR7112-201ENST00000616126 65 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 OR5AC4P-202ENST00000642086 985 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP2AP11388 AC010266.2-201ENST00000564741 3255 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 AC139426.3-201ENST00000605648 2059 ntBASIC6.38□□□□□ -1.39
TOP2AP11388 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP2AP11388 MFSD8-233ENST00000641482 4860 ntBASIC6.37□□□□□ -1.39
TOP2AP11388 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TOP2AP11388 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.37□□□□□ -1.39
TOP2AP11388 AL122016.1-201ENST00000403365 367 ntBASIC6.37□□□□□ -1.39
TOP2AP11388 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP2AP11388 AL591363.1-201ENST00000450091 483 ntBASIC6.37□□□□□ -1.39
TOP2AP11388 BTF3P5-201ENST00000457252 467 ntBASIC6.37□□□□□ -1.39
TOP2AP11388 AC025518.1-201ENST00000479856 347 ntBASIC6.37□□□□□ -1.39
TOP2AP11388 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP2AP11388 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP2AP11388 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP2AP11388 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.37□□□□□ -1.39
TOP2AP11388 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.37□□□□□ -1.39
TOP2AP11388 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.37□□□□□ -1.39
TOP2AP11388 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.37□□□□□ -1.39
TOP2AP11388 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOP2AP11388 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOP2AP11388 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.37□□□□□ -1.39
TOP2AP11388 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TOP2AP11388 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOP2AP11388 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TOP2AP11388 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP2AP11388 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP2AP11388 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP2AP11388 CYCSP10-201ENST00000417973 294 ntBASIC6.36□□□□□ -1.39
TOP2AP11388 EIF4EP1-201ENST00000422311 642 ntBASIC6.36□□□□□ -1.39
TOP2AP11388 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.36□□□□□ -1.39
TOP2AP11388 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TOP2AP11388 AC017015.1-201ENST00000477387 286 ntBASIC6.36□□□□□ -1.39
TOP2AP11388 MIR5186-201ENST00000577504 120 ntBASIC6.36□□□□□ -1.39
TOP2AP11388 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.36□□□□□ -1.39
TOP2AP11388 AC006116.10-201ENST00000591836 581 ntBASIC6.36□□□□□ -1.39
TOP2AP11388 AC115621.1-201ENST00000604653 858 ntBASIC6.36□□□□□ -1.39
TOP2AP11388 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP2AP11388 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC6.36□□□□□ -1.39
TOP2AP11388 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
TOP2AP11388 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TOP2AP11388 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TOP2AP11388 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOP2AP11388 U3.23-201ENST00000391132 200 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 RN7SKP53-201ENST00000411337 315 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 Z75741.1-201ENST00000446793 314 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC6.35□□□□□ -1.39
TOP2AP11388 UBA52P3-201ENST00000491303 382 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TOP2AP11388 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.35□□□□□ -1.39
TOP2AP11388 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.35□□□□□ -1.39
TOP2AP11388 AC016550.3-201ENST00000515706 767 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 RNU1-103P-201ENST00000516502 125 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.35□□□□□ -1.39
TOP2AP11388 TRAV15-201ENST00000556680 249 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 MIR4325-201ENST00000583049 90 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 OR7A8P-201ENST00000595427 913 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TOP2AP11388 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP2AP11388 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TOP2AP11388 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP2AP11388 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TOP2AP11388 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TOP2AP11388 RN7SKP111-201ENST00000410349 271 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.35□□□□□ -1.39
TOP2AP11388 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.35□□□□□ -1.39
TOP2AP11388 RPL26P28-201ENST00000451325 435 ntBASIC6.35□□□□□ -1.39
TOP2AP11388 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.35□□□□□ -1.39
TOP2AP11388 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP2AP11388 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.35□□□□□ -1.39
TOP2AP11388 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.35□□□□□ -1.39
TOP2AP11388 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP2AP11388 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP2AP11388 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOP2AP11388 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOP2AP11388 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOP2AP11388 RNA5SP306-201ENST00000411087 107 ntBASIC6.34□□□□□ -1.39
TOP2AP11388 OR5AW1P-201ENST00000426334 1006 ntBASIC6.34□□□□□ -1.39
TOP2AP11388 AC087650.1-201ENST00000431445 468 ntBASIC6.34□□□□□ -1.39
TOP2AP11388 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.34□□□□□ -1.39
TOP2AP11388 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.34□□□□□ -1.39
TOP2AP11388 RPL6P9-201ENST00000466502 859 ntBASIC6.34□□□□□ -1.39
TOP2AP11388 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.34□□□□□ -1.39
TOP2AP11388 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.34□□□□□ -1.39
TOP2AP11388 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms