Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXC4P09017 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC4P09017 OR1AB1P-201ENST00000585564 761 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 AC084373.1-201ENST00000603311 235 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 AL606490.9-201ENST00000603331 271 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC4P09017 AC090246.1-201ENST00000616499 426 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXC4P09017 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 OR5BE1P-202ENST00000641168 1176 ntBASIC3.99□□□□□ -1.77
HOXC4P09017 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXC4P09017 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC4P09017 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC4P09017 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HOXC4P09017 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC4P09017 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC4P09017 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC4P09017 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 RHOT1P2-201ENST00000366423 333 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 RNU6-213P-201ENST00000384051 104 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 MIR3074-201ENST00000384885 81 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC093719.1-202ENST00000392735 373 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC4P09017 USP9YP19-201ENST00000412165 485 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 PGBD4P8-201ENST00000412993 562 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 RPL36AP36-201ENST00000418616 301 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC099336.2-201ENST00000422457 254 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AL691449.1-201ENST00000426570 421 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC4P09017 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 FABP3P2-201ENST00000453169 399 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC099560.2-201ENST00000457554 255 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 RN7SL585P-201ENST00000470538 280 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC006517.1-201ENST00000480485 328 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC4P09017 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC4P09017 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC4P09017 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC4P09017 AC026402.1-201ENST00000513642 170 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC4P09017 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXC4P09017 MTND6P33-201ENST00000571794 183 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AL133445.2-201ENST00000611191 527 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC4P09017 MIR6500-201ENST00000622700 86 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC092159.4-201ENST00000624944 550 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC4P09017 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC4P09017 AC087565.3-202ENST00000642085 1603 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 AL445437.1-201ENST00000623157 3087 ntBASIC3.98□□□□□ -1.77
HOXC4P09017 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC4P09017 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC4P09017 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC4P09017 RPL32P23-201ENST00000397237 405 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 TCEA1P4-201ENST00000415066 844 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC4P09017 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 AL353597.2-202ENST00000434901 373 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC4P09017 AL157884.3-201ENST00000448273 1184 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 BUD31P2-201ENST00000449374 300 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 CLIC4P1-201ENST00000453177 535 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 RPS3AP6-201ENST00000484430 795 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 RWDD4P1-201ENST00000488019 565 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC4P09017 PPBPP1-201ENST00000510807 373 ntBASIC3.97□□□□□ -1.77
HOXC4P09017 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC4P09017 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms