Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC139713.2-214ENST00000642059 1811 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 ANKRD36P1-201ENST00000344424 659 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 MT-TP-201ENST00000387461 68 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 MTCO1P56-201ENST00000401674 224 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 ERHP2-201ENST00000402323 299 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC104333.2-201ENST00000422630 192 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 RGS17P1-201ENST00000423358 553 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 RPEP3-201ENST00000425462 676 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL360221.1-201ENST00000445989 335 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC108463.1-201ENST00000450258 347 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC013356.1-201ENST00000489027 564 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC093267.1-201ENST00000489176 961 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 MTCO3P7-201ENST00000510008 774 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 XKRY-201ENST00000510392 1100 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 FABP5P12-201ENST00000515543 389 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 IGKV2D-10-201ENST00000520194 281 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC022880.1-201ENST00000534017 973 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC007115.1-201ENST00000546853 234 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC090695.1-201ENST00000561269 1222 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC022069.1-201ENST00000582910 658 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC018618.2-201ENST00000604770 446 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL356218.2-201ENST00000605264 187 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC013468.1-201ENST00000608680 598 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL133243.1-201ENST00000614487 366 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL731566.2-201ENST00000618971 317 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AL359757.1-201ENST00000623176 255 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC006971.1-201ENST00000407916 4486 ntBASIC5.54□□□□□ -1.52
HLA-DOAP06340 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DOAP06340 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DOAP06340 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DOAP06340 OR14L1P-202ENST00000641545 3009 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC090220.1-201ENST00000593078 1699 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 ZNF542P-204ENST00000482727 1305 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DOAP06340 ADAM5-202ENST00000399789 1942 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DOAP06340 RPL32P3-201ENST00000359025 275 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 RNA5SP447-201ENST00000363749 119 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 Y_RNA.194-201ENST00000363985 102 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 U3.35-201ENST00000408405 208 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 ELOCP19-201ENST00000411919 318 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 P2RY10P2-201ENST00000416730 913 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC093084.1-201ENST00000424233 687 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 RPS3AP44-201ENST00000425466 790 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 HSPE1P16-201ENST00000426640 348 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 ELOCP8-201ENST00000439309 332 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 ELOCP15-201ENST00000442090 332 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 TAF9P1-201ENST00000445421 515 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 TAF9P2-201ENST00000454958 515 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 RPS23P7-201ENST00000466210 444 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 FKBP1BP1-201ENST00000553366 325 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC080078.2-201ENST00000603766 501 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 DPRXP5-201ENST00000604662 539 ntBASIC5.53□□□□□ -1.52
HLA-DOAP06340 AC087752.4-201ENST00000605911 462 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms