Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.4□□□□□ -1.71
MSH4O15457 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH4O15457 RPL7P2-201ENST00000427639 268 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AC011742.1-201ENST00000431448 434 ntBASIC4.4□□□□□ -1.71
MSH4O15457 MTCO1P57-201ENST00000432182 261 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AC007563.3-201ENST00000433233 371 ntBASIC4.4□□□□□ -1.71
MSH4O15457 KCTD10P1-201ENST00000434203 625 ntBASIC4.4□□□□□ -1.71
MSH4O15457 MTND2P2-201ENST00000434633 945 ntBASIC4.4□□□□□ -1.71
MSH4O15457 Z74696.2-201ENST00000436514 498 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH4O15457 RPL5P13-201ENST00000462840 709 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
MSH4O15457 GAPDHP36-201ENST00000480688 918 ntBASIC4.4□□□□□ -1.71
MSH4O15457 RN7SL323P-201ENST00000494712 295 ntBASIC4.4□□□□□ -1.71
MSH4O15457 HAUS1P1-201ENST00000505275 832 ntBASIC4.4□□□□□ -1.71
MSH4O15457 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
MSH4O15457 HSPE1P5-201ENST00000561489 272 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH4O15457 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.71
MSH4O15457 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.4□□□□□ -1.71
MSH4O15457 AC005021.1-201ENST00000608730 355 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AC084036.1-201ENST00000609190 508 ntBASIC4.4□□□□□ -1.71
MSH4O15457 AC016911.1-201ENST00000613297 452 ntBASIC4.4□□□□□ -1.71
MSH4O15457 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MSH4O15457 AL139089.1-201ENST00000620372 975 ntBASIC4.4□□□□□ -1.71
MSH4O15457 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.4□□□□□ -1.71
MSH4O15457 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSH4O15457 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.4□□□□□ -1.71
MSH4O15457 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
MSH4O15457 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
MSH4O15457 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSH4O15457 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSH4O15457 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.4□□□□□ -1.71
MSH4O15457 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MSH4O15457 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MSH4O15457 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MSH4O15457 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MSH4O15457 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MSH4O15457 RNU1-64P-201ENST00000365443 163 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC083799.1-201ENST00000366451 910 ntBASIC4.39□□□□□ -1.71
MSH4O15457 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
MSH4O15457 MIR30B-201ENST00000384850 88 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC025750.1-201ENST00000399891 379 ntBASIC4.39□□□□□ -1.71
MSH4O15457 GSTA12P-201ENST00000402398 508 ntBASIC4.39□□□□□ -1.71
MSH4O15457 RNA5SP306-201ENST00000411087 107 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AL512504.1-201ENST00000415494 778 ntBASIC4.39□□□□□ -1.71
MSH4O15457 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
MSH4O15457 KCTD9P3-201ENST00000434597 1169 ntBASIC4.39□□□□□ -1.71
MSH4O15457 CACYBPP1-201ENST00000438592 684 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.39□□□□□ -1.71
MSH4O15457 RPS17P13-201ENST00000448974 407 ntBASIC4.39□□□□□ -1.71
MSH4O15457 RPL21P11-201ENST00000461458 483 ntBASIC4.39□□□□□ -1.71
MSH4O15457 ACTR6P1-201ENST00000514311 1104 ntBASIC4.39□□□□□ -1.71
MSH4O15457 RNU6-491P-201ENST00000516099 110 ntBASIC4.39□□□□□ -1.71
MSH4O15457 SNORA48.9-201ENST00000516419 162 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.39□□□□□ -1.71
MSH4O15457 AC067805.1-201ENST00000559344 470 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.39□□□□□ -1.71
MSH4O15457 NPM1P47-201ENST00000560843 856 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.39□□□□□ -1.71
MSH4O15457 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.39□□□□□ -1.71
MSH4O15457 MIR5685-201ENST00000579080 79 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC093227.2-201ENST00000589357 285 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC079791.1-201ENST00000605356 973 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AC099669.2-201ENST00000616549 437 ntBASIC4.39□□□□□ -1.71
MSH4O15457 AL591424.2-201ENST00000617023 128 ntBASIC4.39□□□□□ -1.71
MSH4O15457 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 AC079298.2-201ENST00000623885 459 ntBASIC4.39□□□□□ -1.71
MSH4O15457 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
MSH4O15457 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 AC104118.1-201ENST00000607625 1589 ntBASIC4.39□□□□□ -1.71
MSH4O15457 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MSH4O15457 AC022893.2-201ENST00000564832 3296 ntBASIC4.39□□□□□ -1.71
MSH4O15457 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MSH4O15457 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH4O15457 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
MSH4O15457 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 RNA5SP97-201ENST00000365006 84 ntBASIC4.38□□□□□ -1.71
MSH4O15457 RHOT1P2-201ENST00000366423 333 ntBASIC4.38□□□□□ -1.71
MSH4O15457 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH4O15457 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH4O15457 MIR199A2-201ENST00000385289 110 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.38□□□□□ -1.71
MSH4O15457 RPL36AP36-201ENST00000418616 301 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AL158073.1-201ENST00000426848 1104 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AC122718.1-201ENST00000439448 744 ntBASIC4.38□□□□□ -1.71
MSH4O15457 Z99127.2-201ENST00000441426 334 ntBASIC4.38□□□□□ -1.71
MSH4O15457 TPTE2P3-201ENST00000441562 1189 ntBASIC4.38□□□□□ -1.71
MSH4O15457 MTCYBP21-201ENST00000443300 1113 ntBASIC4.38□□□□□ -1.71
MSH4O15457 CYCSP53-201ENST00000455540 265 ntBASIC4.38□□□□□ -1.71
MSH4O15457 FAM133DP-201ENST00000464802 691 ntBASIC4.38□□□□□ -1.71
MSH4O15457 AC021205.1-201ENST00000468797 348 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms