Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.38□□□□□ -1.71
TO15178 AC024940.4-201ENST00000605507 246 ntBASIC4.38□□□□□ -1.71
TO15178 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
TO15178 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.38□□□□□ -1.71
TO15178 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TO15178 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TO15178 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TO15178 AL353743.4-201ENST00000422653 1547 ntBASIC4.37□□□□□ -1.71
TO15178 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
TO15178 AC139713.2-215ENST00000641428 5037 ntBASIC4.37□□□□□ -1.71
TO15178 AL139811.1-201ENST00000424779 2299 ntBASIC4.37□□□□□ -1.71
TO15178 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TO15178 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.37□□□□□ -1.71
TO15178 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TO15178 Y_RNA.578-201ENST00000390903 88 ntBASIC4.37□□□□□ -1.71
TO15178 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
TO15178 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.37□□□□□ -1.71
TO15178 AL591848.1-201ENST00000413092 322 ntBASIC4.37□□□□□ -1.71
TO15178 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.37□□□□□ -1.71
TO15178 BTF3P8-201ENST00000414577 526 ntBASIC4.37□□□□□ -1.71
TO15178 RPS7P9-201ENST00000414704 586 ntBASIC4.37□□□□□ -1.71
TO15178 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 RBMY2KP-201ENST00000418221 992 ntBASIC4.37□□□□□ -1.71
TO15178 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.37□□□□□ -1.71
TO15178 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.37□□□□□ -1.71
TO15178 AL360081.1-201ENST00000428299 555 ntBASIC4.37□□□□□ -1.71
TO15178 RPL7P4-203ENST00000430239 730 ntBASIC4.37□□□□□ -1.71
TO15178 RPL21P110-201ENST00000433345 446 ntBASIC4.37□□□□□ -1.71
TO15178 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.37□□□□□ -1.71
TO15178 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
TO15178 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 AC112206.1-201ENST00000468416 477 ntBASIC4.37□□□□□ -1.71
TO15178 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.37□□□□□ -1.71
TO15178 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.37□□□□□ -1.71
TO15178 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TO15178 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 MTND2P32-201ENST00000521584 1038 ntBASIC4.37□□□□□ -1.71
TO15178 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.37□□□□□ -1.71
TO15178 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.37□□□□□ -1.71
TO15178 AL110118.1-201ENST00000553543 400 ntBASIC4.37□□□□□ -1.71
TO15178 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.37□□□□□ -1.71
TO15178 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.37□□□□□ -1.71
TO15178 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.37□□□□□ -1.71
TO15178 RPL26P30-202ENST00000602923 645 ntBASIC4.37□□□□□ -1.71
TO15178 RPAP2P1-201ENST00000603626 1168 ntBASIC4.37□□□□□ -1.71
TO15178 AC024060.1-201ENST00000607052 494 ntBASIC4.37□□□□□ -1.71
TO15178 PART1_2.1-201ENST00000612397 250 ntBASIC4.37□□□□□ -1.71
TO15178 AL353726.1-201ENST00000614041 1000 ntBASIC4.37□□□□□ -1.71
TO15178 AC018926.3-201ENST00000618841 406 ntBASIC4.37□□□□□ -1.71
TO15178 AC091953.3-201ENST00000623220 236 ntBASIC4.37□□□□□ -1.71
TO15178 AC109454.4-201ENST00000623411 649 ntBASIC4.37□□□□□ -1.71
TO15178 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.37□□□□□ -1.71
TO15178 ASNSP1-204ENST00000641977 1664 ntBASIC4.37□□□□□ -1.71
TO15178 AC111188.2-201ENST00000529697 1387 ntBASIC4.37□□□□□ -1.71
TO15178 AC007390.2-201ENST00000606229 3803 ntBASIC4.37□□□□□ -1.71
TO15178 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TO15178 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TO15178 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
TO15178 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
TO15178 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TO15178 AL136964.1-201ENST00000622038 2990 ntBASIC4.36□□□□□ -1.71
TO15178 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
TO15178 USP9YP4-201ENST00000424401 1745 ntBASIC4.36□□□□□ -1.71
TO15178 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TO15178 RNU2-65P-201ENST00000410162 185 ntBASIC4.36□□□□□ -1.71
TO15178 RN7SKP267-201ENST00000410381 285 ntBASIC4.36□□□□□ -1.71
TO15178 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.36□□□□□ -1.71
TO15178 ATG4AP1-201ENST00000416893 538 ntBASIC4.36□□□□□ -1.71
TO15178 RPS12P5-201ENST00000423449 371 ntBASIC4.36□□□□□ -1.71
TO15178 GTF2IP3-201ENST00000433887 494 ntBASIC4.36□□□□□ -1.71
TO15178 AC234064.1-201ENST00000436312 247 ntBASIC4.36□□□□□ -1.71
TO15178 Z80107.1-201ENST00000436830 412 ntBASIC4.36□□□□□ -1.71
TO15178 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 AC006466.1-201ENST00000438721 289 ntBASIC4.36□□□□□ -1.71
TO15178 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.36□□□□□ -1.71
TO15178 H2AFZP5-201ENST00000446960 382 ntBASIC4.36□□□□□ -1.71
TO15178 AC079168.2-201ENST00000453977 416 ntBASIC4.36□□□□□ -1.71
TO15178 FGF7P3-201ENST00000454645 303 ntBASIC4.36□□□□□ -1.71
TO15178 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 AL445433.1-201ENST00000457507 257 ntBASIC4.36□□□□□ -1.71
TO15178 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.36□□□□□ -1.71
TO15178 RPL21P131-201ENST00000497298 483 ntBASIC4.36□□□□□ -1.71
TO15178 RNU2-30P-201ENST00000516209 141 ntBASIC4.36□□□□□ -1.71
TO15178 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.36□□□□□ -1.71
TO15178 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 IGJP1-201ENST00000522682 475 ntBASIC4.36□□□□□ -1.71
TO15178 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.36□□□□□ -1.71
TO15178 OR4U1P-201ENST00000554958 912 ntBASIC4.36□□□□□ -1.71
TO15178 MIR4480-201ENST00000582492 71 ntBASIC4.36□□□□□ -1.71
TO15178 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.36□□□□□ -1.71
TO15178 AP001542.2-201ENST00000593141 364 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms