Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.06□□□□□ -1.76
LSM1O15116 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LSM1O15116 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LSM1O15116 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
LSM1O15116 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.06□□□□□ -1.76
LSM1O15116 AP000357.1-201ENST00000409926 1165 ntBASIC4.06□□□□□ -1.76
LSM1O15116 RNA5SP306-201ENST00000411087 107 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.06□□□□□ -1.76
LSM1O15116 AL512504.1-201ENST00000415494 778 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC007394.1-201ENST00000421941 531 ntBASIC4.06□□□□□ -1.76
LSM1O15116 RPL23AP1-201ENST00000428990 471 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AL772161.1-201ENST00000439130 476 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC245517.2-201ENST00000442890 346 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.06□□□□□ -1.76
LSM1O15116 RPL35AP28-201ENST00000459730 331 ntBASIC4.06□□□□□ -1.76
LSM1O15116 RPL7P48-201ENST00000461513 746 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC023050.1-201ENST00000498198 304 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.06□□□□□ -1.76
LSM1O15116 FABP5P6-201ENST00000510588 409 ntBASIC4.06□□□□□ -1.76
LSM1O15116 OR4V1P-201ENST00000525394 1140 ntBASIC4.06□□□□□ -1.76
LSM1O15116 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.06□□□□□ -1.76
LSM1O15116 AC063950.1-201ENST00000552036 308 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.06□□□□□ -1.76
LSM1O15116 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.06□□□□□ -1.76
LSM1O15116 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.06□□□□□ -1.76
LSM1O15116 AC012557.1-201ENST00000607115 611 ntBASIC4.06□□□□□ -1.76
LSM1O15116 RN7SL722P-201ENST00000617780 284 ntBASIC4.06□□□□□ -1.76
LSM1O15116 RN7SL565P-201ENST00000618246 284 ntBASIC4.06□□□□□ -1.76
LSM1O15116 C2orf27A-204ENST00000623058 969 ntBASIC4.06□□□□□ -1.76
LSM1O15116 AC119674.1-220ENST00000641502 1048 ntBASIC4.06□□□□□ -1.76
LSM1O15116 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LSM1O15116 AL132640.2-201ENST00000559968 1698 ntBASIC4.06□□□□□ -1.76
LSM1O15116 SAGE2P-201ENST00000420011 2126 ntBASIC4.06□□□□□ -1.76
LSM1O15116 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
LSM1O15116 EIF2AP4-201ENST00000424793 1781 ntBASIC4.05□□□□□ -1.76
LSM1O15116 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LSM1O15116 SNORA37-201ENST00000384504 129 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AC009237.5-201ENST00000414271 501 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM1O15116 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.05□□□□□ -1.76
LSM1O15116 RPL9P32-201ENST00000464118 620 ntBASIC4.05□□□□□ -1.76
LSM1O15116 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM1O15116 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM1O15116 IGLVIV-65-201ENST00000517313 360 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AC008802.1-201ENST00000519121 791 ntBASIC4.05□□□□□ -1.76
LSM1O15116 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LSM1O15116 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM1O15116 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM1O15116 AC007599.1-201ENST00000568688 1174 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM1O15116 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 AC005255.1-201ENST00000593748 216 ntBASIC4.05□□□□□ -1.76
LSM1O15116 RPL12P25-202ENST00000598100 674 ntBASIC4.05□□□□□ -1.76
LSM1O15116 Z82195.1-201ENST00000604558 398 ntBASIC4.05□□□□□ -1.76
LSM1O15116 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.05□□□□□ -1.76
LSM1O15116 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM1O15116 MIR7703-201ENST00000620784 77 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AC002044.3-201ENST00000623314 541 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AP001784.1-201ENST00000624107 428 ntBASIC4.05□□□□□ -1.76
LSM1O15116 AC020978.9-201ENST00000624380 1141 ntBASIC4.05□□□□□ -1.76
LSM1O15116 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM1O15116 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM1O15116 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM1O15116 MFSD8-216ENST00000641147 4009 ntBASIC4.05□□□□□ -1.76
LSM1O15116 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LSM1O15116 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
LSM1O15116 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 MFSD13B-201ENST00000420133 1290 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC069213.2-201ENST00000420238 366 ntBASIC4.04□□□□□ -1.76
LSM1O15116 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 AC011998.1-201ENST00000433403 117 ntBASIC4.04□□□□□ -1.76
LSM1O15116 LYPLA1P1-201ENST00000434514 622 ntBASIC4.04□□□□□ -1.76
LSM1O15116 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AF228730.2-201ENST00000438784 848 ntBASIC4.04□□□□□ -1.76
LSM1O15116 CBX1P4-201ENST00000439415 457 ntBASIC4.04□□□□□ -1.76
LSM1O15116 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 PHBP16-201ENST00000446318 950 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.04□□□□□ -1.76
LSM1O15116 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM1O15116 CEACAMP4-201ENST00000457676 421 ntBASIC4.04□□□□□ -1.76
LSM1O15116 RN7SL98P-201ENST00000462271 300 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC006511.1-201ENST00000470614 315 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM1O15116 RPS29P19-201ENST00000479709 171 ntBASIC4.04□□□□□ -1.76
LSM1O15116 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM1O15116 AC231760.1-201ENST00000498002 260 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM1O15116 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM1O15116 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM1O15116 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM1O15116 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.04□□□□□ -1.76
LSM1O15116 IGKV2-23-201ENST00000518729 323 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms