Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MTCO2P18-201ENST00000457151 658 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CCDC75P1-201ENST00000469247 791 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC069304.1-201ENST00000491593 704 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 MTCYBP37-201ENST00000510642 1133 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 EIF3KP3-201ENST00000514461 639 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AF279873.1-201ENST00000523393 313 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CR383656.6-201ENST00000550518 394 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC011840.5-201ENST00000582125 771 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC010487.1-201ENST00000594408 1172 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 PSMA6P4-201ENST00000603247 718 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC091946.2-201ENST00000606105 291 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC073114.1-201ENST00000612027 490 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC008443.7-201ENST00000622195 246 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC015804.1-201ENST00000622935 435 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC098679.5-201ENST00000624394 571 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CYP4F35P-202ENST00000636121 390 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 AC127502.3-201ENST00000636170 1206 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01739-205ENST00000641890 573 ntBASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB1Q9Y5F3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AL353796.1-201ENST00000561542 3241 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC133552.1-201ENST00000569988 4007 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6-115P-201ENST00000364310 107 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RNU1-149P-201ENST00000390870 161 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 U3.36-201ENST00000408418 213 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AL031779.1-201ENST00000415663 330 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 BOLA3P4-201ENST00000418151 400 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 TIMM9P2-201ENST00000419324 266 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 HIGD1AP8-201ENST00000453927 274 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC104689.1-201ENST00000473356 768 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC058823.1-201ENST00000485315 474 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RPL7P41-201ENST00000485823 957 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 NCOR1P1-202ENST00000486162 291 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RPS6P4-201ENST00000494693 758 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 ATP1B1P1-201ENST00000509767 915 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 MTCO3P7-201ENST00000510008 774 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 RFPL1S-203ENST00000539579 330 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 MIR4480-201ENST00000582492 71 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 VN1R92P-201ENST00000598511 928 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC119751.7-201ENST00000600494 245 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC069307.1-201ENST00000602820 447 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC009597.2-201ENST00000604659 592 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC018714.1-201ENST00000605028 208 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC006270.3-201ENST00000605967 1036 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 FAM25E-202ENST00000608562 189 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC026634.1-201ENST00000634369 198 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC025125.1-201ENST00000624743 1922 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 AC004158.1-201ENST00000564508 4319 ntBASIC5.27□□□□□ -1.57
PCDHB1Q9Y5F3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB1Q9Y5F3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms