Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC092393.1-201ENST00000439625 742 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC092809.1-201ENST00000441469 474 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 HMGB1P4-201ENST00000455362 567 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 RPS29P33-201ENST00000456717 146 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC004980.4-201ENST00000513375 203 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 OR4C2P-201ENST00000530855 1064 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 BNIP3P1-201ENST00000547295 580 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC010198.2-201ENST00000550612 259 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC002400.1-201ENST00000569310 726 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC005332.5-201ENST00000591222 2919 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 SGO1P1-201ENST00000603525 1447 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC080013.3-201ENST00000606839 578 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC009704.2-201ENST00000618739 483 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AL603755.1-201ENST00000619504 163 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC099494.2-201ENST00000623371 978 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AP003497.2-201ENST00000624220 967 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 MIR7641-1-201ENST00000627518 61 ntBASIC4.93□□□□□ -1.62
VPS4AQ9UN37 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS4AQ9UN37 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 RNA5SP123-201ENST00000363244 119 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 RNU2-6P-201ENST00000411404 190 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL358176.3-201ENST00000420757 454 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 RPL7P53-201ENST00000421245 739 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC104333.2-201ENST00000422630 192 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC012519.1-201ENST00000424588 610 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 RPL7P44-201ENST00000424827 742 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 RPL21P43-201ENST00000425440 472 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 MTCO1P3-201ENST00000429327 192 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 UBE2V1P1-201ENST00000430836 445 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC009238.2-201ENST00000431026 355 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL445567.1-201ENST00000439121 144 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC104978.1-201ENST00000449387 391 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL591363.1-201ENST00000450091 483 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 RN7SL385P-201ENST00000468873 276 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC068587.1-201ENST00000483613 781 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC104090.1-201ENST00000506341 1171 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC010306.1-201ENST00000523223 1117 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 DUXAP1-201ENST00000556632 463 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC135628.1-201ENST00000568867 534 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC011447.4-201ENST00000587562 111 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC015726.1-201ENST00000602353 681 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC069545.1-201ENST00000605671 358 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC018695.5-201ENST00000605872 315 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 uc_338.9-201ENST00000617424 182 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC012414.7-202ENST00000622705 1090 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC016717.3-201ENST00000624730 554 ntBASIC4.92□□□□□ -1.62
VPS4AQ9UN37 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4AQ9UN37 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms