Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ELOCP8-201ENST00000439309 332 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 TPTE2P3-201ENST00000441562 1189 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 ELOCP15-201ENST00000442090 332 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 SETD6P1-201ENST00000444575 317 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AL133244.1-201ENST00000456007 258 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AL049873.1-201ENST00000480540 376 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AL358832.1-201ENST00000497800 389 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 SNORA70.17-201ENST00000516449 133 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 FTH1P11-201ENST00000517577 551 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC023389.2-201ENST00000580031 955 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC006272.2-201ENST00000594725 163 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC133552.5-201ENST00000604266 540 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC008079.2-201ENST00000623543 20396 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 IPO8P1-201ENST00000455509 3109 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC083899.2-201ENST00000423285 1376 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AL035423.1-201ENST00000420331 213 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC245054.1-201ENST00000420944 258 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC069285.2-201ENST00000440210 275 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC073387.1-201ENST00000453261 709 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 MTND5P1-201ENST00000445440 1375 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 ZNF833P-201ENST00000424938 1494 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 AP000563.1-201ENST00000490865 758 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 AC098799.1-201ENST00000504752 800 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 RN7SKP83-201ENST00000516512 178 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 AC090877.1-201ENST00000561418 344 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 Z95331.1-201ENST00000623075 23112 ntBASIC4.8□□□□□ -1.64
SCN11AQ9UI33 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN11AQ9UI33 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 APOOP2-201ENST00000461561 539 ntBASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AC024224.1-201ENST00000538284 609 ntBASIC4.79□□□□□ -1.64
SCN11AQ9UI33 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AC012603.1-201ENST00000606424 528 ntBASIC4.79□□□□□ -1.64
SCN11AQ9UI33 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 AC011266.1-201ENST00000624119 3569 ntBASIC4.79□□□□□ -1.64
SCN11AQ9UI33 CDY11P-201ENST00000447168 1651 ntBASIC4.79□□□□□ -1.64
SCN11AQ9UI33 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 MFSD8-236ENST00000641509 4050 ntBASIC4.79□□□□□ -1.64
SCN11AQ9UI33 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCN11AQ9UI33 RNU1-33P-201ENST00000364249 162 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AC096644.3-201ENST00000416788 338 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AL591503.2-201ENST00000442314 1005 ntBASIC4.78□□□□□ -1.64
SCN11AQ9UI33 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms