Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 IGLVIV-53-201ENST00000520107 367 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 NPM1P35-201ENST00000533043 868 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC090953.1-201ENST00000604305 1092 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 MIR6867-201ENST00000610636 67 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 MIR6830-201ENST00000636015 70 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC017007.4-201ENST00000503353 1352 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 SNORA70C-201ENST00000384538 135 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 RNU1-89P-201ENST00000384592 164 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL807761.1-201ENST00000417622 171 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 Z97055.1-201ENST00000419730 712 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL138785.1-201ENST00000425821 331 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 OR5AW1P-201ENST00000426334 1006 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC092809.1-201ENST00000441469 474 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC098824.1-201ENST00000453565 980 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 RPL5P32-201ENST00000454085 879 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 DNAJC19P1-201ENST00000455312 319 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 RPS7P7-201ENST00000463499 571 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 RPL7P19-201ENST00000469948 618 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC004069.2-201ENST00000505438 1114 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC005798.1-201ENST00000513715 387 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC090877.1-201ENST00000561418 344 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL133247.2-201ENST00000603236 482 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL161912.3-201ENST00000605404 628 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 HMGB1P50-201ENST00000605814 607 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC023043.4-201ENST00000612081 449 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC000123.2-201ENST00000623124 461 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 AC110792.3-201ENST00000595906 1614 ntBASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS29Q9UBQ0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VPS29Q9UBQ0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VPS29Q9UBQ0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VPS29Q9UBQ0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AL121657.1-201ENST00000327215 531 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC126755.2-208ENST00000327792 462 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC138969.1-213ENST00000331436 462 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 MIR199A2-201ENST00000385289 110 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC016769.2-201ENST00000414815 475 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC093084.1-201ENST00000424233 687 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 PPIAP15-201ENST00000479662 484 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC008802.1-201ENST00000519121 791 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 SUMO2P20-201ENST00000520803 283 ntBASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS29Q9UBQ0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms