Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 RNU4-4P-201ENST00000364588 130 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 OR8V1P-201ENST00000395193 873 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 U3.36-201ENST00000408418 213 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC006960.1-201ENST00000419980 153 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 MFSD13B-201ENST00000420133 1290 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 GTF2IP23-201ENST00000423746 351 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AL158073.1-201ENST00000426848 1104 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 UBE2V1P5-201ENST00000440070 405 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 COX6CP18-201ENST00000448769 222 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC073850.1-201ENST00000449243 255 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 BX248409.1-201ENST00000455497 255 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AL133477.1-201ENST00000457472 514 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC004453.1-201ENST00000487895 408 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 UBA52P3-201ENST00000491303 382 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 TCP11X3P-202ENST00000514289 1254 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC092490.3-201ENST00000545370 572 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC125611.1-201ENST00000549563 229 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 DUXAP1-201ENST00000556632 463 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC087465.1-201ENST00000560574 245 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC090888.1-201ENST00000561335 1141 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 MIR4646-201ENST00000580775 63 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC011447.4-201ENST00000587562 111 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC121247.2-201ENST00000604776 136 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 SNORD91B-202ENST00000608459 222 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 VIS1.1-201ENST00000610517 203 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC139792.2-201ENST00000624218 587 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 AP003400.3-201ENST00000624904 346 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 CYP4F35P-202ENST00000636121 390 ntBASIC4.99□□□□□ -1.61
VPS50Q96JG6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS50Q96JG6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS50Q96JG6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 DDX18P4-201ENST00000511690 1966 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC053481.2-202ENST00000582394 1500 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 RPL23P2-201ENST00000320371 421 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 U8.4-201ENST00000363626 134 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 RNU6-317P-201ENST00000384031 107 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 MIR600-201ENST00000385007 98 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 DBIP1-201ENST00000401435 260 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 DUTP5-201ENST00000406790 469 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 RNU6-757P-201ENST00000410334 100 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 RN7SKP273-201ENST00000411392 314 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC073136.2-201ENST00000417282 849 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 PAICSP7-201ENST00000419829 962 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 RPS20P1-201ENST00000434853 354 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 GSTA7P-201ENST00000438425 448 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC092809.1-201ENST00000441469 474 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 348.5 ms