Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LINC01109-201ENST00000603837 3081 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF4Q92544 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF4Q92544 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF4Q92544 RNU6-178P-201ENST00000384631 104 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 MIR195-201ENST00000385194 87 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 RNU6-244P-201ENST00000391028 104 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC009302.1-201ENST00000417147 390 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC092634.2-201ENST00000428146 1010 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC073143.1-201ENST00000436316 395 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC009963.2-201ENST00000453431 138 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AL672167.3-201ENST00000465951 960 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 RPL23AP37-201ENST00000479658 549 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 RN7SKP122-201ENST00000515923 296 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 OR10V3P-201ENST00000525712 725 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AP004607.9-201ENST00000618202 316 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AC104985.3-201ENST00000623479 597 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 AL121950.1-201ENST00000624993 2077 ntBASIC4.37□□□□□ -1.71
TM9SF4Q92544 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TM9SF4Q92544 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC104118.1-201ENST00000607625 1589 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC108467.2-201ENST00000617640 1597 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 RNA5SP447-201ENST00000363749 119 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 RNU4-7P-201ENST00000364758 141 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 NCSTNP1-201ENST00000406229 144 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 ELOCP19-201ENST00000411919 318 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 MTATP6P20-201ENST00000414147 562 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC004690.1-201ENST00000418216 328 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 USP9YP21-201ENST00000420603 432 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 ARL4AP3-201ENST00000441452 574 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AL358794.1-201ENST00000445689 381 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC005008.1-201ENST00000456151 612 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC013356.1-201ENST00000489027 564 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 RPS4XP18-201ENST00000495480 763 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC091868.1-201ENST00000508746 304 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 IGHV3-63-201ENST00000518422 341 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 RPL21P7-201ENST00000557463 483 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 ZNF971P-201ENST00000562068 1249 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC011453.2-201ENST00000603737 729 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 AL133338.2-201ENST00000604292 736 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC073387.2-201ENST00000604797 784 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC091979.2-201ENST00000607514 214 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC009464.1-201ENST00000615731 469 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC234782.5-201ENST00000617723 324 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC004232.3-201ENST00000622977 525 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AP000676.4-201ENST00000624659 623 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AL049536.1-201ENST00000625043 744 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC019226.2-201ENST00000625973 424 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 MIR6830-201ENST00000636015 70 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms