Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RPEP2-201ENST00000432149 701 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 FTH1P16-201ENST00000435241 552 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 RPL23AP43-201ENST00000446445 471 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 MTND2P8-201ENST00000450555 1025 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 RPL9P32-201ENST00000464118 620 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC023050.1-201ENST00000498198 304 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC111193.1-201ENST00000504097 155 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 RNA5SP73-201ENST00000516744 108 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC021006.3-201ENST00000530771 192 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC008033.2-201ENST00000542626 177 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 MIR3667-201ENST00000581025 74 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AL355816.1-201ENST00000607951 118 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC116651.1-201ENST00000609724 556 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC245389.2-201ENST00000616023 576 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 U6.48-201ENST00000618523 106 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC242843.1-201ENST00000618702 573 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 MIR6853-201ENST00000619642 74 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 AC008785.1-201ENST00000624475 456 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 IQCB2P-201ENST00000401788 1633 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC71LQ8N9Z2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AL353743.4-201ENST00000422653 1547 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AL391361.1-201ENST00000405580 489 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 HMGB3P18-201ENST00000406327 590 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 PTP4A1P5-201ENST00000420305 455 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC005154.2-201ENST00000438110 379 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC114495.1-201ENST00000441274 436 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 ARL5AP2-201ENST00000444698 533 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 NPM1P17-201ENST00000479221 602 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 RPS26P15-201ENST00000488067 348 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 RN7SL205P-201ENST00000490174 284 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC010374.1-201ENST00000503762 1237 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 POLR2KP1-201ENST00000553226 168 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC106785.3-201ENST00000564064 847 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC012254.4-201ENST00000588843 273 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 BNIP3P19-201ENST00000605397 577 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC005014.3-201ENST00000605985 190 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC099669.2-201ENST00000616549 437 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC138907.10-201ENST00000623708 983 ntBASIC3.6□□□□□ -1.83
CCDC71LQ8N9Z2 AC024023.1-201ENST00000624530 922 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms