Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 MIR486-1-201ENST00000612171 68 ntBASIC5.77□□□□□ -1.49
VPS8Q8N3P4 AL034408.1-202ENST00000636088 415 ntBASIC5.77□□□□□ -1.49
VPS8Q8N3P4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 ATP5F1P4-201ENST00000397288 746 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 AC006499.5-201ENST00000505037 514 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 RN7SKP13-201ENST00000515933 244 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 RN7SKP18-201ENST00000516005 275 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 AC008489.1-201ENST00000524271 483 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 AC023161.2-201ENST00000551218 780 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 KPNA2P2-201ENST00000419546 1489 ntBASIC5.76□□□□□ -1.49
VPS8Q8N3P4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS8Q8N3P4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 RNA5SP119-201ENST00000362715 117 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 DBIP2-201ENST00000419076 262 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 YWHAEP5-201ENST00000431545 765 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 RN7SKP157-201ENST00000516174 282 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 AC006960.3-201ENST00000561845 705 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 LSM1P2-201ENST00000604911 322 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 MFSD8-236ENST00000641509 4050 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS8Q8N3P4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.75□□□□□ -1.49
VPS8Q8N3P4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC093578.1-201ENST00000415219 368 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 HMGN2P31-201ENST00000432430 273 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC106707.2-201ENST00000484182 374 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 TRAV15-201ENST00000556680 249 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AL360157.1-201ENST00000565962 87 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC005261.6-201ENST00000623072 1387 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 MTND2P11-201ENST00000423638 648 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 ATP5JP1-201ENST00000431631 322 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC099563.1-201ENST00000456086 418 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC008155.2-201ENST00000464337 397 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC004069.2-201ENST00000505438 1114 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC010342.1-201ENST00000514047 877 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 MIR3922-201ENST00000585192 84 ntBASIC5.74□□□□□ -1.49
VPS8Q8N3P4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS8Q8N3P4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 LINC02471-203ENST00000641941 4752 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 RNU1-18P-201ENST00000363062 164 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 HMGN2P8-201ENST00000391458 268 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 AC245052.5-201ENST00000416320 649 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 AC245054.1-201ENST00000420944 258 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 KLKP1-201ENST00000595979 403 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 MIR4727-201ENST00000622232 55 ntBASIC5.73□□□□□ -1.49
VPS8Q8N3P4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS8Q8N3P4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AC017079.2-201ENST00000416102 485 ntBASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AC006946.1-201ENST00000429106 328 ntBASIC5.72□□□□□ -1.49
VPS8Q8N3P4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms