Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AP003461.1-201ENST00000528866 78 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC008083.2-201ENST00000546707 476 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC027104.1-201ENST00000563702 681 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC005951.1-201ENST00000576706 485 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AL392112.1-201ENST00000605115 829 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC010424.2-201ENST00000607594 443 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 VIS1.1-201ENST00000610517 203 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 MIR6862-1-201ENST00000613016 70 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 MIR6862-2-201ENST00000614755 70 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AL603755.1-201ENST00000619504 163 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 MIR6886-201ENST00000619864 61 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC012414.7-202ENST00000622705 1090 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC015804.1-201ENST00000622935 435 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC067852.7-201ENST00000623270 535 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC007490.1-201ENST00000624321 703 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.46□□□□□ -1.69
CLIP4Q8N3C7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.46□□□□□ -1.69
CLIP4Q8N3C7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLIP4Q8N3C7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 METTL21EP-201ENST00000298105 713 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 SNORA51.1-201ENST00000363243 140 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 U3.35-201ENST00000408405 208 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AP000357.1-201ENST00000409926 1165 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 RNU4-72P-201ENST00000410754 173 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC013404.1-201ENST00000413068 249 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC105402.1-201ENST00000413336 545 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 PTP4A1P5-201ENST00000420305 455 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 USP9YP26-201ENST00000421008 661 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 RPF2P1-201ENST00000424137 906 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 YWHAEP5-201ENST00000431545 765 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 RPL7P11-201ENST00000437586 658 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 COX7BP2-201ENST00000437976 242 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC004938.1-201ENST00000438468 308 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 CDY12P-201ENST00000440679 1015 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL353093.1-201ENST00000441292 436 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 Z80107.2-201ENST00000445127 392 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 CDY13P-201ENST00000445813 1015 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC234781.3-201ENST00000452540 973 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 TPTE2P5-203ENST00000458118 728 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC096741.1-201ENST00000472250 846 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 RN7SL727P-201ENST00000482164 296 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC113347.3-201ENST00000509113 148 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 FABP5P12-201ENST00000515543 389 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 RNA5SP34-201ENST00000516887 130 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 RN7SKP147-201ENST00000517154 244 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC010306.1-201ENST00000523223 1117 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC025260.1-201ENST00000548858 430 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL358913.1-201ENST00000554342 121 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC008015.1-201ENST00000555505 465 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC018552.1-201ENST00000562099 811 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC093249.4-201ENST00000564755 259 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 MIR4675-201ENST00000577898 77 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC011453.2-201ENST00000603737 729 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL008729.2-201ENST00000606393 473 ntBASIC4.46□□□□□ -1.7
CLIP4Q8N3C7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms