Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RNU5F-7P-201ENST00000363696 115 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AL512422.1-201ENST00000407033 553 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RN7SKP206-201ENST00000410823 293 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RPL35AP3-201ENST00000414680 288 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 PCBP2P1-201ENST00000437262 977 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 MTATP6P30-201ENST00000443540 664 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 NANOGNBP1-201ENST00000448444 480 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 HMGB1P36-201ENST00000487709 576 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RN7SL101P-201ENST00000496350 279 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AP001189.2-201ENST00000527320 189 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC079600.1-201ENST00000550326 297 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 MIR4776-2-201ENST00000580204 80 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC011445.2-201ENST00000599274 173 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 BX323046.1-201ENST00000610145 535 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 CR381653.2-201ENST00000624041 768 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 AC104623.2-202ENST00000623477 4002 ntBASIC6.47□□□□□ -1.37
PDZRN4Q6ZMN7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDZRN4Q6ZMN7 AC027088.4-201ENST00000611559 1947 ntBASIC6.46□□□□□ -1.37
PDZRN4Q6ZMN7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC103591.2-201ENST00000265259 766 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 Y_RNA.11-201ENST00000362375 109 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RNA5SP375-201ENST00000362975 119 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RNU6-1066P-201ENST00000363573 105 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RNU6-761P-201ENST00000384148 107 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 CIR1P3-201ENST00000405137 479 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AL450992.3-201ENST00000413192 568 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AL354890.1-201ENST00000413730 346 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC114814.2-201ENST00000419195 485 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC113412.1-201ENST00000425840 504 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 SKP1P3-201ENST00000429280 487 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC104306.1-201ENST00000449702 371 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AP006222.1-205ENST00000450734 457 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 DNAJB5P1-201ENST00000454004 806 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RPL7P48-201ENST00000461513 746 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RPL30P9-201ENST00000465586 330 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RN7SL269P-201ENST00000467795 305 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC083795.1-201ENST00000491760 320 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AL049874.2-201ENST00000492636 288 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AL358832.1-201ENST00000497800 389 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC105252.1-201ENST00000503089 286 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 IMPA1P1-201ENST00000510718 842 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 RPS27AP18-201ENST00000515536 459 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC239860.2-201ENST00000525886 270 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC087276.1-201ENST00000529659 480 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AP002373.2-201ENST00000541631 1060 ntBASIC6.46□□□□□ -1.38
PDZRN4Q6ZMN7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms