Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 AC010740.1-201ENST00000417035 684 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AL590762.4-201ENST00000425885 253 ntBASIC4.35□□□□□ -1.71
TPM4P67936 MTCO3P21-201ENST00000430791 643 ntBASIC4.35□□□□□ -1.71
TPM4P67936 SKP1P1-201ENST00000438081 489 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM4P67936 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 TRBV12-2-201ENST00000489763 344 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AC068305.1-201ENST00000497406 726 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM4P67936 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM4P67936 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM4P67936 PSMB7P1-201ENST00000556349 514 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM4P67936 AC090877.1-201ENST00000561418 344 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.35□□□□□ -1.71
TPM4P67936 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM4P67936 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
TPM4P67936 PSMA6P4-201ENST00000603247 718 ntBASIC4.35□□□□□ -1.71
TPM4P67936 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TPM4P67936 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TPM4P67936 AP002001.2-201ENST00000529025 1469 ntBASIC4.35□□□□□ -1.71
TPM4P67936 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM4P67936 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM4P67936 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TPM4P67936 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM4P67936 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM4P67936 OR4K17-201ENST00000315543 1032 ntBASIC4.34□□□□□ -1.71
TPM4P67936 RNA5SP447-201ENST00000363749 119 ntBASIC4.34□□□□□ -1.71
TPM4P67936 MT-TP-201ENST00000387461 68 ntBASIC4.34□□□□□ -1.71
TPM4P67936 AC092642.1-201ENST00000392417 425 ntBASIC4.34□□□□□ -1.71
TPM4P67936 TRGV7-201ENST00000427089 353 ntBASIC4.34□□□□□ -1.71
TPM4P67936 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM4P67936 AC073069.1-201ENST00000428657 441 ntBASIC4.34□□□□□ -1.71
TPM4P67936 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM4P67936 RPL21P11-201ENST00000461458 483 ntBASIC4.34□□□□□ -1.71
TPM4P67936 MTND6P6-201ENST00000478031 263 ntBASIC4.34□□□□□ -1.71
TPM4P67936 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM4P67936 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.34□□□□□ -1.71
TPM4P67936 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM4P67936 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM4P67936 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM4P67936 CYCSP29-201ENST00000533731 318 ntBASIC4.34□□□□□ -1.71
TPM4P67936 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM4P67936 MIR4330-201ENST00000579077 105 ntBASIC4.34□□□□□ -1.71
TPM4P67936 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM4P67936 AC110743.1-201ENST00000584870 478 ntBASIC4.34□□□□□ -1.71
TPM4P67936 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM4P67936 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM4P67936 VN1R84P-201ENST00000593697 235 ntBASIC4.34□□□□□ -1.71
TPM4P67936 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TPM4P67936 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM4P67936 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM4P67936 CFTRP2-201ENST00000634304 199 ntBASIC4.34□□□□□ -1.71
TPM4P67936 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TPM4P67936 AC007529.1-201ENST00000418574 2178 ntBASIC4.34□□□□□ -1.72
TPM4P67936 PWAR6-201ENST00000552334 4618 ntBASIC4.33□□□□□ -1.72
TPM4P67936 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 RNA5SP399-201ENST00000364003 117 ntBASIC4.33□□□□□ -1.72
TPM4P67936 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM4P67936 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TPM4P67936 AL161909.1-201ENST00000397390 712 ntBASIC4.33□□□□□ -1.72
TPM4P67936 AL159169.1-201ENST00000421119 127 ntBASIC4.33□□□□□ -1.72
TPM4P67936 RPL21P109-201ENST00000422213 475 ntBASIC4.33□□□□□ -1.72
TPM4P67936 AC073464.3-201ENST00000422564 712 ntBASIC4.33□□□□□ -1.72
TPM4P67936 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM4P67936 AC006455.6-201ENST00000426192 893 ntBASIC4.33□□□□□ -1.72
TPM4P67936 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.33□□□□□ -1.72
TPM4P67936 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM4P67936 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM4P67936 AC005229.2-201ENST00000456995 399 ntBASIC4.33□□□□□ -1.72
TPM4P67936 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
TPM4P67936 AC008638.1-201ENST00000506035 866 ntBASIC4.33□□□□□ -1.72
TPM4P67936 AC020593.1-201ENST00000507399 299 ntBASIC4.33□□□□□ -1.72
TPM4P67936 AC108475.1-201ENST00000507880 950 ntBASIC4.33□□□□□ -1.72
TPM4P67936 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM4P67936 MIR4715-201ENST00000584117 79 ntBASIC4.33□□□□□ -1.72
TPM4P67936 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM4P67936 AC019131.2-201ENST00000609071 870 ntBASIC4.33□□□□□ -1.72
TPM4P67936 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM4P67936 AC019193.2-201ENST00000610012 634 ntBASIC4.33□□□□□ -1.72
TPM4P67936 MIR6868-201ENST00000611215 58 ntBASIC4.33□□□□□ -1.72
TPM4P67936 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 OR6C71P-202ENST00000641886 1107 ntBASIC4.33□□□□□ -1.72
TPM4P67936 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM4P67936 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TPM4P67936 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TPM4P67936 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM4P67936 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms