Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SUMO3P55854 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 MTCO1P14-201ENST00000441695 1559 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 SNORA16A-201ENST00000384342 137 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SUMO3P55854 U3.25-201ENST00000391209 220 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 SNORA68.2-201ENST00000391263 128 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 SNRPEP2-201ENST00000397592 279 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 HSPA8P15-201ENST00000401676 786 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AL133388.1-201ENST00000404509 287 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 RNU2-21P-201ENST00000410368 188 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 AL133325.1-201ENST00000421090 382 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AL354766.1-201ENST00000423396 542 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 CHEK2P5-201ENST00000423877 246 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC005033.1-201ENST00000428904 813 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AL136231.1-201ENST00000429407 730 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC244035.1-201ENST00000430042 390 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 RPS20P1-201ENST00000434853 354 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 VN1R10P-201ENST00000447106 875 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 RPL39P6-201ENST00000448289 150 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SUMO3P55854 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 RAP1BP2-201ENST00000478270 544 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 RN7SL184P-201ENST00000488308 297 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 RN7SL101P-201ENST00000496350 279 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 IGBP1P4-201ENST00000503202 879 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC106872.4-201ENST00000510050 523 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 MTND5P13-201ENST00000513046 1079 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 BX510359.5-201ENST00000515651 304 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC106038.2-201ENST00000520706 568 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 AP004607.2-201ENST00000533949 322 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC127381.1-201ENST00000555979 939 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.88□□□□□ -1.63
SUMO3P55854 AGGF1P8-201ENST00000562979 1000 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.88□□□□□ -1.63
SUMO3P55854 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 RNU6-88P-201ENST00000606801 100 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AL022394.1-201ENST00000606979 292 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AL451064.1-201ENST00000607718 471 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC092653.1-201ENST00000608509 531 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC079395.2-201ENST00000610982 737 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC078899.5-201ENST00000612475 178 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 MIR6837-201ENST00000620884 64 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 AC018816.2-201ENST00000621460 353 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 AL078621.3-201ENST00000623707 2042 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 AC011978.2-201ENST00000569835 2054 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SUMO3P55854 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.88□□□□□ -1.63
SUMO3P55854 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SUMO3P55854 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.87□□□□□ -1.63
SUMO3P55854 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SUMO3P55854 SAGE2P-201ENST00000420011 2126 ntBASIC4.87□□□□□ -1.63
SUMO3P55854 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SUMO3P55854 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SUMO3P55854 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SUMO3P55854 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.87□□□□□ -1.63
SUMO3P55854 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SUMO3P55854 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SUMO3P55854 RPL21P132-201ENST00000331267 462 ntBASIC4.87□□□□□ -1.63
SUMO3P55854 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SUMO3P55854 RN7SKP149-201ENST00000363008 344 ntBASIC4.87□□□□□ -1.63
SUMO3P55854 Y_RNA.302-201ENST00000364997 102 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms